Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01416 ATGGACACCAATTCTAGATTCTTGCTTCACACTTTCACACCTTCTTCAACCATGGCACCCTTCATCATCTTCAACTCCAAGCTTCAATCCAGAGTACTTGTTCTTGTCCTCAACTTGGCTTTCATCTTCCTCTTCTGTCTCCTTCTCAACCTTTATCTCCACCCTCCTAACTCAGATTCTCAGGGCCACTCCAATGCCTCTCTCCTCACAATCTTCAACCATGCAAGGCTCTTCAGAGATGTCAGTGTTGAAGGCTGCACTGATATACACAAGTACTCAGATTTTGACTCCAAGTGTTTGTATGTCAAAAGTAACCTTGAGTGCAGGTCAAAGGGATACATCAACTATCTTCAAATCTTCTATTGCAACTCGGGAAAATTCCCAATTTTGGGACAAACCCTCCTTGCCTTGTGGCTTATAGTGTTGTTTTATCTGTTGGGTGACACTGCTTCCAACTACTTCTGCAGTTCCTTGGAGGGTTTGTCCAACATCCTGAGACTCTCCCCCACCATTGCGGGAGTGACCCTTCTTTCTCTGGGAAATGGTGCTCCTGATTTCTTTGCCAGCGTTGTGTCTTTCTCAGGATCATCCAGCAACGGTGCGGTTGGACTCAACAGCATCCTAGGAGGGTCTTTCTTTGTGTCGTGTGTTGTCTTGGGGGTCATAAGCATTCTGGTTAGCCCAAATCAGGTTGAGGTTGAAAAGGCCAGTTTCATCAGAGATGTCCTTTTCTTCCTTCTCTCTCTTTTCATCCTCCTCATCATCATTTACATCGGTAAAATCACTTTGTTTGCATCAATCTGCTATGTTTCAATCTACTTCCTCTACGTGTGTGCTGTCTCAGCCACACATCTCATATATGGAAAGGACACAACAAATGCAAGGCAATATTCAATGTCTTGTGAGGAGTCACTAGCGCCTAGCATACCTTTGTTGGGGTATGTTGATGAAGAGAAACAAAGTTTGGCAGAGATAGTGGTGGTTGAAGATAAGGACCAAAACCAAAAGCATAAGCCAGCTAGTAGTACTTTTGGTGATGATAATAACTCATTCTTTGATTGGCTTTACTTTGGAAAGTTGCTACAACTGCTGGAACTACCTCTTTGCTTACCAAGAAGGCTTACAATTCCTGTGGTGAGTAAGGAGAAGTGGTCAAAGCCATTTGCAGTAATATCTGTGACATTGGCACCAGTTTTACTTGCAGTTCTTTTCAACACTCAGAGTGAAAACGTGGCTTCAAGGAGTAGCATAGTCACATACATAGTAGCTGCTTTGATTGGGATAGTTTTGGGCAACATGGCATGCGTGACAACTGATAGGTGTAGCCCACCAACCAAGTCCTTGTTTCCTTGGCTTGCTGGTGGCTTTGCCATGAGTGTAACATGGACTTACATAATTGCTGCTGAGCTAGTTTCTGTGTTGGTTTCAATTGGGAGCATAGTTGGGGTTAGCCCTTCGGTGCTAGGACTAACAGTCCTAGCTTGGGGGAACTCACTTGGGGACTTCATAGCCAATGGTGCCATGGCCTTAAATGGTGGGGCAGATGGTGTTCAAATGGCCATATCTGGTTGCTATGCTGGTCCTATGTTCAATACCTTGATGGGTTTGGGGTTACCCCTTGTGCTCTCAGCTTTGTCTGATAACCCAGACCCTTATGTGATTCCCAAGGATCCTTCACTCTATGCGACCCTTTTGTTCTTGATGGGAGGGCTTCTTTGGGCACTTGTGATCTTGCCAAAGAAGAGTATGAAATTGGATAAATCCTTAGGGGTAGGGCTTCTCAGTGTTTACCTCTGTTTTTTGGTAATAAGGATTGCTCTGGCTTTTGGGGTTGTCAAATTCTAG 1845 0.4455 MDTNSRFLLHTFTPSSTMAPFIIFNSKLQSRVLVLVLNLAFIFLFCLLLNLYLHPPNSDSQGHSNASLLTIFNHARLFRDVSVEGCTDIHKYSDFDSKCLYVKSNLECRSKGYINYLQIFYCNSGKFPILGQTLLALWLIVLFYLLGDTASNYFCSSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFSGSSSNGAVGLNSILGGSFFVSCVVLGVISILVSPNQVEVEKASFIRDVLFFLLSLFILLIIIYIGKITLFASICYVSIYFLYVCAVSATHLIYGKDTTNARQYSMSCEESLAPSIPLLGYVDEEKQSLAEIVVVEDKDQNQKHKPASSTFGDDNNSFFDWLYFGKLLQLLELPLCLPRRLTIPVVSKEKWSKPFAVISVTLAPVLLAVLFNTQSENVASRSSIVTYIVAALIGIVLGNMACVTTDRCSPPTKSLFPWLAGGFAMSVTWTYIIAAELVSVLVSIGSIVGVSPSVLGLTVLAWGNSLGDFIANGAMALNGGADGVQMAISGCYAGPMFNTLMGLGLPLVLSALSDNPDPYVIPKDPSLYATLLFLMGGLLWALVILPKKSMKLDKSLGVGLLSVYLCFLVIRIALAFGVVKF 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01416 614 Pfam Sodium/calcium exchanger protein 452 605 IPR004837 GO:0016020|GO:0055085
Viun1g01416 614 Pfam Sodium/calcium exchanger protein 136 279 IPR004837 GO:0016020|GO:0055085
Viun1g01416 614 Gene3D - 167 294 IPR044880 -
Viun1g01416 614 Gene3D - 387 606 IPR044880 -
Viun1g01416 614 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 42 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01416 Viun-Chr1 25523573 25525881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01416 94 613 Antiporters AT5G17860 51.238 4.13e-171 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01416 K13754 - gmx:100819204 885.56