Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01375 ATGGATTACTTACAAGAAAACAACGCAATAGATTTGAAGGACATCAATTTATTAGAAGAAGATGGTGATAGTGGAACTATCTTGGACGAGGAAGGTATTGATAAGGAAGACAACGAAAAGCACTCTGAGGATGTCGTTTCTCCGTGTGTTGGGATGTATTTTGACAGTGTTGACGACGTCAAGAAATTTTACAAAGAATACGCTATTAAAAGTGGTTTCAGAACAAGAATCAGAACTTCGAGAAAAGACGATGACAATCAATTATGTTACTTCAAATTAGTGTGTTCGCGGGAGGGAAAGTGTGTGTCGTCCATACCACCTGAAATGAAGACACTGCCCACACAAAGAAAACAATGTCCTGCGTGCATTACTGTCGTTAGAAGAGAAGATAAATGGATGATTAGCAATGTGGTCCATGAACACAATCATGACGTAAGTCCCTCCAAGTCAAGACTAATTCGTGGGAATAGGAAGTTGAATATGCAAGCCAAAAGAACCCTTGACATAAATGACGAAGCGGGTGTGCGTATTCACAAGAGCTTTCTTTCTTTGGTGTGTGATGCAGGGGGGTTTGAGAACTTGCATTTTGTCGAAAGAGACGCAAGAAACTATATTGGTCAGCAACGACGCGCTTTAGGGAAGGAAGGTGACGGACAAGCTTTATTAAATCATTTTTCCAGTATGAGGGAGTTGAACAAAGACTTCTTTTTTGAAATTGATGTTGATGTAGATAATCGCATAACCAATATATTTTGGGCAGACGGAAGGAGTCGGGCTGCATGTGCAGATTTTGGTGACATTGTGTCCTTCGACACCACATACTTAACTAATAAGTACGATATGCCTTTTGCACCATTTGTGGGTGTTAATCACCATGGTCAGTCAATCTTATTAGGGTGTGAGCTTATATGTGCTGAAGATACTTGCATGTCCACAACTCAAAGAAGTGAGAGAATGAATGCTTTCTTTGATGGGTTCATCAACTCTACTACAACACTCCAGCAATTTGTTGTCCAATATGACAACGCCCTTCGTTCTAAGGCGGAGAAAGAGTGCAAATCAGATTTTGCTTCTGCTAATACTACCCTTCCATGTGGGTCTCAGTCATTTATTGAGAGACAATTTCAAGATGAATACACTGATGCGAAGTTTGGTGAAGTGTAA 1164 0.4029 MDYLQENNAIDLKDINLLEEDGDSGTILDEEGIDKEDNEKHSEDVVSPCVGMYFDSVDDVKKFYKEYAIKSGFRTRIRTSRKDDDNQLCYFKLVCSREGKCVSSIPPEMKTLPTQRKQCPACITVVRREDKWMISNVVHEHNHDVSPSKSRLIRGNRKLNMQAKRTLDINDEAGVRIHKSFLSLVCDAGGFENLHFVERDARNYIGQQRRALGKEGDGQALLNHFSSMRELNKDFFFEIDVDVDNRITNIFWADGRSRAACADFGDIVSFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCELICAEDTCMSTTQRSERMNAFFDGFINSTTTLQQFVVQYDNALRSKAEKECKSDFASANTTLPCGSQSFIERQFQDEYTDAKFGEV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01375 387 Pfam FAR1 DNA-binding domain 62 146 IPR004330 -
Viun1g01375 387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 309 386 IPR031052 GO:0006355
Viun1g01375 387 Pfam MULE transposase domain 267 312 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01375 Viun-Chr1 25041183 25042717 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun1g01375 MULE 7.9e-10 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01375 - - vun:114190181 794.653