Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01359 ATGGTTACCATCCAAAGTTCCGATCTTGTAGTGCCCTCCGAGATTACGCCAAATTCAATCTCTTCACTCTCCCTCTGCGATCAAATCAAGCTTCCCAACCACGGATCTCAGCTCTATATCTACACCAACACAAGCATCACCGATGATTCATCCTTCGCTTCTGCGATTCACACTCTCTCAACCTCTCTCAGCAAAACCCTCACCGTCTTCCACCCTGTCGCCGGTCGCTTGAGCCGGATCCACGGTGGCCGCTTCCAGCTTCTCTGCAACGCCAAAGGGGTACTCCTCGTAGCAGCCACGTGCAACACTGAACTCAGTTTCCAAGATCTGTGTGAGTTCGCTCCCACCTACGCTGTCCCCAAGATCAACTACGATGTCCCGATTGAGGATGTTCCTTTGCTGGCGGCGCAGCTCACCAGGTTCCCCAGCGGTTTCACCACACTTGGAATTGCCATGTGTCGCGCTTTCCTCGATGGAACTGCACTTTCGAACTTCGTTAGCTCCTGGGCCAAAATCGCCAGAGGAGAGAGTATAGATTCCGGTTTGATTCCTTTGTTTGATCGAACCAAACTAGATTCGTTCAAACTGAATAAACCGCCGCGGTTTGAACATCCCGAGTTTCTGCCACCGCCCCTTTGGGCAAAACGCGATGAGGTGATGCAGCACGAACTGGGTACGGCCGTGATGGTAATCACAAAAGGGCAAGTTCAGAAACTGAAGAATAGAGCGAGTGACTTTGGAATTGGGCATGGTAAGGTTCCCGTACGAGGTTTTACCAGCTTTGAGGTCATAAGTGGTCACTTGTGGAGGTGTATGTGCAAGGTTCGTTATTCAGGTGATGTGTCTCAACCAACGAGGTTGAACACTTTGGTTAACTGTAGAAAACGTTTGAGGCCATCAATTCCCACTGCTTATTTTGGCAATGCGACATTTCCTACTGTGACAGAAACTTGTTCCTTTGATGAGATTATGCAGAAACCTCTTGGCTATGCTGTGAGGAAAGTGAGGGACTCGATTGAGAGAATGCGTGATGAGTATGTTAGGTCTGCTCTTGATTACATAGCACGTGTGGAGGACATGGATTTGTTGAGAGACACGTTTTACAACTCTGCTGGAAAAGGTAGAGAAGACCCTAATGTGAATGTGGTTGGTTGGGCTAATTTTTCGTATTTTGAGACTGATTTTGGGTGGGGAAAACCTGTTATTTTGCTTCCTGGAAACATTAATTCTAATGGCAAGGCTTTCCTTTTGGACACCGCAAATGGCGATGGCTTCGTTGTAGCTGTTTGTTTGCGGAAATCGTATGTAGACGTGTTGAAGAAGTTGTTCTTTGAGGATATAGAGAAGCATGCTTCTAAATTGTGA 1365 0.4755 MVTIQSSDLVVPSEITPNSISSLSLCDQIKLPNHGSQLYIYTNTSITDDSSFASAIHTLSTSLSKTLTVFHPVAGRLSRIHGGRFQLLCNAKGVLLVAATCNTELSFQDLCEFAPTYAVPKINYDVPIEDVPLLAAQLTRFPSGFTTLGIAMCRAFLDGTALSNFVSSWAKIARGESIDSGLIPLFDRTKLDSFKLNKPPRFEHPEFLPPPLWAKRDEVMQHELGTAVMVITKGQVQKLKNRASDFGIGHGKVPVRGFTSFEVISGHLWRCMCKVRYSGDVSQPTRLNTLVNCRKRLRPSIPTAYFGNATFPTVTETCSFDEIMQKPLGYAVRKVRDSIERMRDEYVRSALDYIARVEDMDLLRDTFYNSAGKGREDPNVNVVGWANFSYFETDFGWGKPVILLPGNINSNGKAFLLDTANGDGFVVAVCLRKSYVDVLKKLFFEDIEKHASKL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01359 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 433 - -
Viun1g01359 454 Pfam Transferase family 1 441 - -
Viun1g01359 454 Gene3D - 1 209 IPR023213 -
Viun1g01359 454 Gene3D - 213 445 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01359 Viun-Chr1 24757415 24759152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01359 2 445 Monolignol Biosynthesis Gene Families AT5G48930 31.718 5.53e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01359 K13065 - gmx:100819383 639.802