Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01358 ATGGTGAGCATTCAATCTCGATACACTGTGTTCCCCTCAGAAACCACCCCCAACGAAACACTCTTCTCCCTGTGCGAGCAAATCAAGCTTCGCACCCATGCACCACTCCTTTACGTCTTCAAGCCACACCCTCATCACGATGCATCAAGTTTTGTCAACATTCTGAGGCATGCTCTAAGCAAAGCCTTGACGATCTATTACCCAGTTGCGGGTAGGTTGAGTTGGATCCAAGGGGGACGATGGGAGCTTCATTGCAATGCCAAGGGTGCCCAAATATTGGAAGCCATTTGCAAAGACGTGACTTTGGATGATTTGGGTGATTTTGTGCCTACCCATTTGGTGTCACAGCTCATACCAAACATCGACTATGATGTTCCCATTGAGGACACGCCATTGTTGGTTGCGCAGCTTACGAGGTTCCCTTGTGGCGGCGTTACCATTGGGGTGGCTTTGTGTCGAGGGGCCATCGACGGAATCGCAACCATGCGGTTCATGAACACGTGGGCCAAGTTGGCTCGTGGGGAGAACGTGGAAAAGGCACCGTGCCATGATCGAAATGTTTTGAATTCGTACAAGGGTAACTCCGGGTTGCACGATCATTCGGAGTTTCACCCTCCTCCTCCTTGGTTAGGTCCCTTGGAGAAAGACACCAAGGTGGCGGTTGCAACAGTGAAGCTCACGGGTGAACAAGTGAAGAAGCTCAAGCACAAGGGGAATCTCGCGAACACTGGTCCTAGTTCACAACAACGTTATTCAACTTTTGAGGTTGTTTCAGGGCACTTGTGGAGGTGTGTGAGTAAAGCACGTTATGCAGGGAAAAGAGAGCAACCTACGAGGTTGACCACTTTGGTTAATTGTAGGCACCGAATGAAGCCACCACTTCCTGAAGATTATGCAGGGAACACAGCATTTCCGACAGTGACACCAACATGTTCTTTCGGTGAAATCATGCAGAGGCCATTGAGTTATGCGGTTGGGAACGTTAGGGTTGCGCTTGAAAGAGTAACCGGGGAGTTTGTGGAGTCTGCACTTGATCACATAGATAGGGAGAAAGACATGAATTTGATTAGGTATAATTTTCACTACCCTGCCCCAAGTGTGCACAAGGGAGCATACAAGGGGAACCCGAATCTTTTTGTTGTGAGTTGGATGAATTTCTCGTTCAAGGATGCGGATTTTGGATGGGGAGAACCCTTGTATTTTGGCCCTGGATTCATGGATTCTGAAGGAAAAGCATTTCTTTTGAATGAGGCTAATGGGGATGGCATCATTGTGGCCATTTCCCTCGAAGCATCTCACATGGATGCTTTCAAGAAATTTTTTTACGCTGATATCGAGCAGGAATCTCTCATTTCCAAACTGTGA 1365 0.4813 MVSIQSRYTVFPSETTPNETLFSLCEQIKLRTHAPLLYVFKPHPHHDASSFVNILRHALSKALTIYYPVAGRLSWIQGGRWELHCNAKGAQILEAICKDVTLDDLGDFVPTHLVSQLIPNIDYDVPIEDTPLLVAQLTRFPCGGVTIGVALCRGAIDGIATMRFMNTWAKLARGENVEKAPCHDRNVLNSYKGNSGLHDHSEFHPPPPWLGPLEKDTKVAVATVKLTGEQVKKLKHKGNLANTGPSSQQRYSTFEVVSGHLWRCVSKARYAGKREQPTRLTTLVNCRHRMKPPLPEDYAGNTAFPTVTPTCSFGEIMQRPLSYAVGNVRVALERVTGEFVESALDHIDREKDMNLIRYNFHYPAPSVHKGAYKGNPNLFVVSWMNFSFKDADFGWGEPLYFGPGFMDSEGKAFLLNEANGDGIIVAISLEASHMDAFKKFFYADIEQESLISKL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01358 454 Gene3D - 1 205 IPR023213 -
Viun1g01358 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 441 - -
Viun1g01358 454 Gene3D - 213 443 IPR023213 -
Viun1g01358 454 Pfam Transferase family 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01358 Viun-Chr1 24743455 24745383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01358 2 442 Monolignol Biosynthesis Gene Families AT5G48930 35.857 8.07e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01358 K13065 - gmx:100775549 719.924