Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01357 ATGAATTCTTCCGACTACGAAAACACTTATTCCACCATTGTCATAGACTCCAACCATACGCTGAAGGTGTGCTTCGATAAGTCTATTTATCCAGGTTCTGCCCTTTGGCTGGAAAATTCATTGGAGGAAACACTTCCTTCATTTGTCCTGCAATTCGCCATTATCCTCGCTCTCAACCGCTTCTTCTTCGTTCTTGCAGAACAATGCCATTTACCTCGTATTGTTGCCAATATTTTTACTGGTTTTCTGTTAGGTACATCTGTCATGGGACGCTGGAAAGTTTTCATGGACCAGTTATTTCCTTTCAGCAACATGATACCATTGGAGACGGTGGGATCGTTGGCCCTTGTTTACTACGTGTTCCTGGTGGGCCTAGAGATAGACTTGAATCCAATAAAGACGTTGAACAGAAAGACCAAAGTTATAGCCATTGCAAGCACCATCTTCCCCATACCAATAGGAATTGGCTTGTACTACCTGCTTGTCACGGACATGGGGCGAAAACATTTGGACAGTGACAACGTTAGACCAAAGGGTGCAATATTATGGGGGCTCGCCCTTTCGTGCAGCAGTGAGTTCCCTGAGATTGCAAAGATCCTTTCAGATCTGAAGCTTCTTCTCACGGAGAACGGACAACTGGCTCTCACAGCTTCTCTCCTTAACGACTTGACTTCATGGACCCTTCTTGTCTTGGCCCTATCACAATTCTACCACGCTTCAGTGGTATCGTTTGTCATCACCGTGGTGGTTCTGTTCTTGTGTTTTGTGGCACTTAACCCCCTTTTCAAGTGGGCATTCAACAATGTGGGAATGGCGGATAAAGAGTTCTTGGAGTCACAGGTCATATTTGTGCTGAATGTGGTTTTGGTTGTTGGCTTGTTAACTGATGGACTGGGCGTGCTTTCGATAACGGGGGCTTTCTTTCTGGGTGTTGTGATACCTCAGGGGTCGCTTAACAATGCGGTGCAGGACAAGGTGCAGGATTTTGTGTCTGTTATGCTGATGCCTTTGTTCTTTGTGGTTGTTGGAGAGAGGATTAGGATCCAAGACTTGGCCTTGCAGACACATTGGACAACTGTGTTGGTGGTGGTTGTGTTGGCCATGGTGACCAAGATTGTCTGCACTATGGCTGCCACTTGGTTCTACCGGATGCCACACATGGAAGGATTATCCCTTGCAATGCTCATGAACACTAAAGGAATAATGCCATTGATCATTCTCTGCACCGGCAGGGACAGACATGAACTGGACAGCCAAACCTTTGGGGTGATGATGTTGGCGTGCTGGTTAATGACAATCCCAGTGGGACCTGTCTCATCAGCTCTGGCAAATGCACTGAAAAGCAGAATGGTTATGGGAAGCCTAAGAAGAACGCATGACACACAACCAGACTCACCCCTGAAACTCCTAGCCTGCATCCACACAAAGCGCGATGCAAACGTGATTATCGACCTCTTAAAAGCCTCATGTCCCTCTGTGAGAAACCCTATCCAACTTCTAGCAGTGGAACTGAACAAAACGACCAATCGCCCCGCCGCGGCACTCATCATAAGGAACGCTCGGAACACATCCTTCACCTCGAGGTCCTTGAAGCTAGGCTCCGAAGACACCCTGGGAAGCTTCGACACTCTCAACCAGGCCATCTTCGCAGAGAAAATTAGTATCATGTCAGACTACAACACCATGCACCAGGACATCATCAACCTCGCACGACACAGAGGTGTGACACTTATCTTATCCACATTCCACAAGCAACCAACCTACGATGGTTTGGGAGCAGGAGCTGCAACTGCAAGAGCTGTGAACATCATCAACCGCGACCATGCAAGCAAAGACGAGAAGAAAGTGGTGTTAGAGAGTCTGGCTAAGAATGCACCGTGTTGTTTGGCCATATTGGTGGACAGAGGGTTGAGTGGCAAGCGTTCGAAGGAGCTACGCGTGGCTATGTTCTACGTGGGTGGTGCTGATGACCGTGAAGCTCTTTCTTATGCATGGAGGATGACTAGGAGTTCTGATGTGAATTTAACGGTGGTGAGGCTTGTTTGGGAGAACCCTAATGACGAGTTTGATGAAATGGATAAGGAGTTCATCAAAGGGTTTATGAAACAGATGGGGGATTCGACAAAGGTGAGGTATTTGGAGAAGGTGGTGCGGGATGAGAAGAAAACAGTGAAGCTTTTGAACAAGATAGGGAAAAAAGGGTTTGATTTGTTTGTTGTGGGAAGAGGGCATGGGAGGAAGATGTCATTGGCACAAACGGTGGATCCTGTGTTGGAGGAGGCTGTGTTAGGGCCTCTTGGGGATGCTTTGACGGATCTGAACTCTGCGGCTGAAACCTCGATTTTGATATTCCAAAGACAGGGTGAAGAAGTGGAAGGGAAGCATGTGAGGTCTGCATCATCTCCTGATGGAAATGTGTTTAGTTGCATGATGGAGCAGATGCTGATGTGCCCTTCAACCAAGTCTACTGTGATTTTACCTCAGTAG 2487 0.4745 MNSSDYENTYSTIVIDSNHTLKVCFDKSIYPGSALWLENSLEETLPSFVLQFAIILALNRFFFVLAEQCHLPRIVANIFTGFLLGTSVMGRWKVFMDQLFPFSNMIPLETVGSLALVYYVFLVGLEIDLNPIKTLNRKTKVIAIASTIFPIPIGIGLYYLLVTDMGRKHLDSDNVRPKGAILWGLALSCSSEFPEIAKILSDLKLLLTENGQLALTASLLNDLTSWTLLVLALSQFYHASVVSFVITVVVLFLCFVALNPLFKWAFNNVGMADKEFLESQVIFVLNVVLVVGLLTDGLGVLSITGAFFLGVVIPQGSLNNAVQDKVQDFVSVMLMPLFFVVVGERIRIQDLALQTHWTTVLVVVVLAMVTKIVCTMAATWFYRMPHMEGLSLAMLMNTKGIMPLIILCTGRDRHELDSQTFGVMMLACWLMTIPVGPVSSALANALKSRMVMGSLRRTHDTQPDSPLKLLACIHTKRDANVIIDLLKASCPSVRNPIQLLAVELNKTTNRPAAALIIRNARNTSFTSRSLKLGSEDTLGSFDTLNQAIFAEKISIMSDYNTMHQDIINLARHRGVTLILSTFHKQPTYDGLGAGAATARAVNIINRDHASKDEKKVVLESLAKNAPCCLAILVDRGLSGKRSKELRVAMFYVGGADDREALSYAWRMTRSSDVNLTVVRLVWENPNDEFDEMDKEFIKGFMKQMGDSTKVRYLEKVVRDEKKTVKLLNKIGKKGFDLFVVGRGHGRKMSLAQTVDPVLEEAVLGPLGDALTDLNSAAETSILIFQRQGEEVEGKHVRSASSPDGNVFSCMMEQMLMCPSTKSTVILPQ 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01357 828 Gene3D - 46 450 IPR038770 -
Viun1g01357 828 Pfam Sodium/hydrogen exchanger family 54 435 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun1g01357 828 PANTHER CATION/H + ANTIPORTER 20 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01357 Viun-Chr1 24713348 24716448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01357 23 786 Antiporter Super Family AT2G13620 32.130 3.56e-129 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01357 K26731 - gmx:100780176 1154.81