Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01279 ATGGGAACCTCTGGCCAAAAATCTGCATCACCTCTCTCAGATCTGAAGGTGACAATCCACGAAACTTCAACCATTTTTCCATCCAAACAAACGGAGAAGAAGTGCTTGTTCCTATCAAACATCGACAAGGTAGTAAACTTTGACGTGGAGACGCTTCACTTCTTCGCAGCAAACAAAGCTTTTTCACTCCAAAAGGTGGCTGAGAAGTTGAAGAAGGCCCTGGAGGATGTTCTTGTTCACTATTCCTTCTTAGCCGGAAGGTTGAGACAGAATGCTGAAACCAAAAGATTAGAGATAGATTGCAACGCAAAAGGTGCTGCGTTTGTGGTGGCTTCATGTAAGCACAAGTTAAGTGAGCTTGGAGACTTGGCTTATCCCAATCCAGCTTTTGCAAAATTGGTTCACAAGAGTAAGGATAAGGATCTTCCACTCGCTGTGCAGCTAACATCCTTTGACTGTGGTGGCTTCGCAATGGGCTTCACAACAAGCCACGCAGCCTTTGACGGACTTAGCTTCAAAACCTTCTTGGACAACCTTGCTGCACTGGCTGCTAATAAGCCCATGCCTGTGATGCCCTGCCACGACAGGCACCTCCTGGCTGCACGATCCCCGCCACGTGTAACCTTTGCGCACCCCGAGTTGGCCGAGCTCGATTACTCACCCATAGCATCCACTGAGTCCAATGTCTTTGATGCTTCCAAAGGTCCTAAGTCCAATGTCTTTGATGTTTCCAAAGGTCTTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACCGAGTCCAATGTCTTTGATGCTTCCAAAGGTACTAAGTCCAACGTCTTTGATGCTTCCAAAGGTACTGGGTCCAACGTCTTTGATGTTTCCAAAGGTACTGGGTCCAACGTCTTTGATGATTCCAAAGGTACTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACTGGGTCCAACGTCTTTGATGTTTCCAAAGGTCCTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACTAAGTCCAACGTCTTAGATGTTTCCAAAGGTCCTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACCGAGTCCAACGTCTTTGATGCTTCCAAAGAAAAATTGGACTTTAGGGTTTTCAAACTAACCCCCGAAGACATTGTGAGCCTTAAGGAGAAAGCAAAGGGAAGCACCAACGACAGCAACACCGGGTTTAACGCTATCACCGCCCATATATGGCGGTGCAAGGCCTTATCAGCACCGTATGACCCAACGGGATCATCGACCGTACTATTCCCCGTGGACATACGCTCCAAATTGAACCCTCCGTTGCCAGAAGGCTTTGCAGGAAATGCTGTGTTAACGGCGTTTGCCACGGCGAAATACGAGGAGTTGGAGAAGGGTGAGTTTTCAAGGTTAGTGGAGATGGTGAAGGAGGGTGCAGAGAGAATGAATGATGAGTATGCGAGGTCTGTTATAGACCATGGAGAGCTGTGTGATGGGTTTCCACGTGGGGATGTTTTGATTTCTTCGTGGCAAAGATTAGGGTTTGAAAAGGTGGAGTATCCGTGGGGGAAGCCCAAATATTGTTGCCCTGTGGTGCATCAACGGAAGGAAATTATTCTGTTGTTTCCTCCCTTTGTCGCAGGTGGTGATGATGGGATCAACATTATAGTGGCTCTTCCTCCCAAGAAATTGGAAAAATTCGAGAACCTCTTTCACACGTTCTTGCGTTCAGTTTGA 1725 0.4725 MGTSGQKSASPLSDLKVTIHETSTIFPSKQTEKKCLFLSNIDKVVNFDVETLHFFAANKAFSLQKVAEKLKKALEDVLVHYSFLAGRLRQNAETKRLEIDCNAKGAAFVVASCKHKLSELGDLAYPNPAFAKLVHKSKDKDLPLAVQLTSFDCGGFAMGFTTSHAAFDGLSFKTFLDNLAALAANKPMPVMPCHDRHLLAARSPPRVTFAHPELAELDYSPIASTESNVFDASKGPKSNVFDVSKGLESNVFDASKGTESNVFDASKGTKSNVFDASKGTGSNVFDVSKGTGSNVFDDSKGTESNVFDASKGTGSNVFDVSKGPESNVFDASKGTKSNVLDVSKGPESNVFDASKGTESNVFDASKEKLDFRVFKLTPEDIVSLKEKAKGSTNDSNTGFNAITAHIWRCKALSAPYDPTGSSTVLFPVDIRSKLNPPLPEGFAGNAVLTAFATAKYEELEKGEFSRLVEMVKEGAERMNDEYARSVIDHGELCDGFPRGDVLISSWQRLGFEKVEYPWGKPKYCCPVVHQRKEIILLFPPFVAGGDDGINIIVALPPKKLEKFENLFHTFLRSV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01279 574 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 566 - -
Viun1g01279 574 Pfam Transferase family 15 229 - -
Viun1g01279 574 Pfam Transferase family 353 566 - -
Viun1g01279 574 Gene3D - 351 569 IPR023213 -
Viun1g01279 574 Gene3D - 11 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01279 Viun-Chr1 23754574 23756517 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01279 362 567 Monolignol Biosynthesis Gene Families AT5G48930 27.679 5.42e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01279 K13065 - vun:114180759 1075.08