Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01278 ATGGGAACCTCTGGCCAAAAATCTGCATCACCTCTCTCAGATCTGAAGGTGACAATCCACGAAACTTCAACCATTTTTCCATCCAAACAAACGGAGAAGAAGTGCTTGTTCCTATCAAACATCGACAAGGTAGTAAACTTTGACGTGGAGACGCTTCACTTCTTCGCAGCAAACAAAGCTTTTTCACTCCAAAAGGTGGCTGAGAAGTTGAAGAAGGCCCTGGAGGATGTTCTTGTTCACTATTCCTTCTTAGCCGGAAGGTTGAGACAGAATGCTGAAACCAAAAGATTAGAGATAGATTGCAACGCAAAAGGTGCTGCGTTTGTGGTGGCTTCATGTAAGCACAAGTTAAGTGAGCTTGGAGACTTGGCTTATCCCAATCCAGCTTTTGCAAAATTGGTTCACAAGAGTAAGGATAAGGATCTTCCACTCGCTGTGCAGCTAACATCCTTTGACTGTGGTGGCTTCGCAATGGGCTTCACAACAAGCCACGCAGCCTTTGACGGACTTAGCTTCAAAACCTTCTTGGACAACCTTGCTGCACTGGCTGCTAATAAGCCCATGCCTGTGATGCCCTGCCACGACAGGCACCTCCTGGCCGCACGATCCCCGCCACGTGTAACCTTCGCGCACCCCGAGTTGGCCGAGCTCGATTACTCACCCATAGCATCCACTGAGTCCAATGTCTTTGATGCTTCCAAAGGTCCTAAGTCCAATTTCTTTGATGTTTCCAAAGGTCCTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACTGAGTCCAATGTCTTTGATGCTTCCAAAGGTACTAAGTCCAACGTCTTTGATGCTTCCAAAGGTACTAAGTCCAACGTCTTTGATGTTTCCAAAGGTACTGGGTCCAACGTCTTTGATGATTCCAAAGGTACTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACTAAGTCCAACGTCTTTGATGTTTCCAAAGGTCCTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACTAAGTCTAACGTCTTAGATGTTTCCAAAGGTCCTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACTAAGTCCAACGTCTTAGATGTTTCCAAAGGTCCTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACTGAGTCCAACGTCTTTGATGCTTCCAAAGGTACCGAGTCCAATGTCTTTGATGCTTCCAAAGGTACTAAGTCCAACGTCTTTGATGATTCCAAAGAAAAATTGGACTTTAGGGTTTTCAAACTAACCCCCGAAGACATTGTGAGCCTTAAGGAGAAAGCAAAGGGAAGCACCAACGACAGCAACACCGGGTTTAACGCTATCACCGCCCATATATGGCGGTGCAAGGCCTTATCAGCACCGTATGACCCAACGAGATCATCGACCGTACTATTCCCCGTGGACATACGCTCCAAATTGAACCCTCCGTTGCCGGAAGGCTTTGCAGGAAATGCTGTGTTAACGGCGTTTGCCACGGCGAAGTACGAGGAGTTGGAGAAGGGTGAGTTTTCAAGGTTAGTGGAGATGGTGAAGGAGGGTGCAGAGAGAATGAATGATGAGTATGTGAGGTCTGTTATAGACCGTGGAGAGCTGTGTGATGGGTTTCCACGTGGGGATGTTTTGGTGTCTTCGTGGCAAAGATTAGGGTTTGAAAAGGTGGAGTATCCGTGGGGGAAGCCCAAATATTGTTGCCCTGTGGTGCATCAACGAAAGGAAATTATTCATTTGTTTCCTCCCTTTGTCGCAGGCGGTGATGATGGGATCAACCTTATAGTGGCTCTTCCTCCCAAGAAATTGGAAAAATTCGAGAACCTCTTTCACACGTTCTTGCGTTCAGTTTGA 1890 0.4683 MGTSGQKSASPLSDLKVTIHETSTIFPSKQTEKKCLFLSNIDKVVNFDVETLHFFAANKAFSLQKVAEKLKKALEDVLVHYSFLAGRLRQNAETKRLEIDCNAKGAAFVVASCKHKLSELGDLAYPNPAFAKLVHKSKDKDLPLAVQLTSFDCGGFAMGFTTSHAAFDGLSFKTFLDNLAALAANKPMPVMPCHDRHLLAARSPPRVTFAHPELAELDYSPIASTESNVFDASKGPKSNFFDVSKGPESNVFDASKGTESNVFDASKGTKSNVFDASKGTKSNVFDVSKGTGSNVFDDSKGTESNVFDASKGTKSNVFDVSKGPESNVFDASKGTESNVFDASKGTKSNVLDVSKGPESNVFDASKGTKSNVLDVSKGPESNVFDASKGTESNVFDASKGTESNVFDASKGTKSNVFDDSKEKLDFRVFKLTPEDIVSLKEKAKGSTNDSNTGFNAITAHIWRCKALSAPYDPTRSSTVLFPVDIRSKLNPPLPEGFAGNAVLTAFATAKYEELEKGEFSRLVEMVKEGAERMNDEYVRSVIDRGELCDGFPRGDVLVSSWQRLGFEKVEYPWGKPKYCCPVVHQRKEIIHLFPPFVAGGDDGINLIVALPPKKLEKFENLFHTFLRSV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01278 629 Pfam Transferase family 15 229 - -
Viun1g01278 629 Pfam Transferase family 408 621 - -
Viun1g01278 629 Gene3D - 403 624 IPR023213 -
Viun1g01278 629 Gene3D - 11 216 IPR023213 -
Viun1g01278 629 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01278 Viun-Chr1 23708792 23711149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01278 428 581 Monolignol Biosynthesis Gene Families AT5G48930 29.940 2.67e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01278 K13065 - vun:114180759 1257.28