Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01249 ATGGAACCGGAATCTGGAACTTCGACTTCTCGGAATCCTTCTCAGTTGTCCTGGGTGAATCTCTCTCGGAATCTAATATTAGCATATCAAAGCTTTGGTGTGGTGTACGGGGATCTGAGCACTTCACCTCTCTATGTGTTTACGAGCGCGTTCAGGGGAAAGTTACTGGATCACCATGATGAAGAAACAATATTTGGAACTTTCTCGTTGATTTTTTGGACCCTTACTCTGATTCCGTTGCTTAAATATGTATTCATCTTATTGAGTGCTGATGACAACGGGGAAGGTGGGACATTTGCTCTTTATTCTCTGCTCTGCAGACATGCGAAGTTTAATTTACTCCCCAATCAACAAGCAGCTGATGAGGAGTTATCGTCCTATAAATATGGCCCCTCTTCACAGGCTGCGGCCTCTTCTCCATTGAAGAGGTTTCTAGAGAAACATAAAAGGTTAAGAACCGCCCTGCTTGTTGTGGTACTATTTGGTGCTTGCATGGTCGTTGGTGATGGTGTGCTTACTCCAGCAATTTCAGTTCTAGCATCAGTGTCAGGATTAAAAGTGACAGAAAAGAAATTAACAGATGGTGAACTTGTCCTGCTTGCCTGTGTCATATTGGTTGGACTGTTTGCTCTCCAACATTGTGGCACGCACAAAGTAGCATTTATGTTTGCTCCAATTGTAATCATCTGGCTTGTATCAATATTTTCTGTTGGGCTGTATAATACAATCCATTGGAATCCACAAATAGTCCGTGCTATATCGCCATATTATATCATAAAGTTTTTTAGCAAGACTGGTAAAGAAGGTTGGGTTTCTCTTGGAGGGATACTTCTCTGTATCACTGGAACTGAAGCTATGTATGCAGATCTTGGTCATTTCACTGCTTTGTCAATAAGGCTTGCATTTGCATTTGTTATATACCCATGTTTGGTAGTACAGTACATGGGCCAAGCTGCTTTCTTGTCTAAAAACCTCAACTCTGTTGATAACAGTTTTTATGACTCAATACCTGAACCTGTGTTTTGGCCTGTTTTTGTTATTGCCACCCTTGCTGCAATTGTTGGGAGTCAAGCTGTTATAACTGCAACTTTCTCAATCATCAAGCAGTGTCATGCACTTGGTTGCTTTCCTCGAGTTAAAGTTGTACACACCTCAAAACATATATATGGACAGATTTATATCCCAGAAATCAATTGGATACTTATGATCTTAACGCTTGCCATAACCATTGGATTTCAGGACACAACCATAATTGGAAATGCATATGGACTTGCTTGTATGACAGTTATGTTCGTAACTACATTTCTGATGACACTAGTCGCAATCTTTGTCTGGCAGAAAAGTGTGTTCATTGCTATAGCATTTCTTTTATTCTTTTGGGTGATAGAGGGAGTATATCTATCATCTGCATTCATCAAAGTGCCTCAGGGAGGATGGGTTCCTCTTGTCTTATCGTTCTTCTTCATGGCTGTTATGTACGTGTGGCATTATGGAACTCGTCGGAAGTATAGCTATGATCTGCACAACAAAGTTTCATTGAAATGGTTACTGGGCTTGGGCCCGAGCCTTGGCATTGTTCGTGTCCCAGGGATTGGTCTCATCTACACCGAACTAGCTACCGGAATACCTGCTATATTTTCCCATTTTGTAACAAATCTTCCTGCATTTCACAGGGTGCTGGTTTTTGTTTGTGTAAAATCGGTTCCTGTTCCATATGTTTCACCTGAAGAACGTTTCCTTATCGGGCGAGTTTGTCCCAGACCATATCGAATGTATAGGTGCATTGTCAGATATGGTTACAAGGACATTCAAAGGGATGATGGAGATTTTGAGAATCATCTTATACAGAGTATAGCAGAATTTATCCAAATGGAAGCAGTGGAACCCCAGTTTTCAAGTTCTGAAGCTTCTTCACTTGATGGGAGGATGGCTGTTATAAGTTCTAGGAACTTAGAATATACTTCAAGTTTAATCGTTTCAGAGCATGAGGATATTGGCGTGGACATATCCATCCCTAGCAGCAGATCTGTAACCCTAAGAAGTTTGCAATCGGTTTATGATGATGAAAGCCCACAAATTAGAAGGAGACGAGTAAGATTTCAGCTACCAGAAAATCCTGGCATGAATCCAGATGTCAAGGAAGAGCTTTTGGATTTAATTCAAGCCAAGGATGCTGGGGTTGCATATATCATGGGGCACTCGTATGTGAAGGCAAGGAAATCATCCTCATTCTTGAAAAAACTTGTGATTGATATTGGCTACTCATTTCTGCGGAAAAATTGCAGGGGTCCAGCTGTAGCTCTTAACATTCCTCACATTAGTCTTATCGAAGTTGGAATGATATATTATGTGTAG 2355 0.4093 MEPESGTSTSRNPSQLSWVNLSRNLILAYQSFGVVYGDLSTSPLYVFTSAFRGKLLDHHDEETIFGTFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQAAASSPLKRFLEKHKRLRTALLVVVLFGACMVVGDGVLTPAISVLASVSGLKVTEKKLTDGELVLLACVILVGLFALQHCGTHKVAFMFAPIVIIWLVSIFSVGLYNTIHWNPQIVRAISPYYIIKFFSKTGKEGWVSLGGILLCITGTEAMYADLGHFTALSIRLAFAFVIYPCLVVQYMGQAAFLSKNLNSVDNSFYDSIPEPVFWPVFVIATLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAITIGFQDTTIIGNAYGLACMTVMFVTTFLMTLVAIFVWQKSVFIAIAFLLFFWVIEGVYLSSAFIKVPQGGWVPLVLSFFFMAVMYVWHYGTRRKYSYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYTELATGIPAIFSHFVTNLPAFHRVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENHLIQSIAEFIQMEAVEPQFSSSEASSLDGRMAVISSRNLEYTSSLIVSEHEDIGVDISIPSSRSVTLRSLQSVYDDESPQIRRRRVRFQLPENPGMNPDVKEELLDLIQAKDAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01249 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun1g01249 784 NCBIfam potassium uptake protein 27 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun1g01249 784 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01249 Viun-Chr1 23154668 23159364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01249 1 784 Inorganic Solute Cotransporters AT3G02050 78.580 0.0 1245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01249 K03549 - gmx:100776888 1488.01