Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01219 ATGGTTGCTCAAGCTCTCGACCTTGTTGATCAGCCTCTAATGGTTTCCACAAGAGGGGAGGATAGTGTAAATTCGAATTCGTCTGTTACGAATGGCGTTAATGGAGATACGGATTTAAAGAAATTGAAAAAATCGAAGGTTTCTCCAACCACGCCGCGGAGGTCCAGCGCTCGAATTCAAGCGCTGCAGAAAACGGAGAAGACACTAGCTGGACCAAATGCAATAGTAGTTAAAGAGAAGGACAAATGCCAAGACAATGTTAAGGAAGAGAAGGGTAAGAAGCGCAGTAGAAAGAGTGGCGCCGGTGAGAGTTTGGTGGTGGAAGAAGCGTCTGTGGAAGAAGAGTCTGTTTTACTGCTGAAGAAAAAACCATCCGCATGTGACAAGGATGACATTAAACCAGAGAATGCAGTTGGACAATCTGGAGATAAGAGTGATACAGTTAAAGTTAAAGATACTATAAGATTGTTCAATAAACATTATCTGCAATTTGTTCAGGAAGAAGAAAAAAGGTGTGGAAAGGTTGAGACTCAGCCCAAGGATGCTAACACTTCTAAGAAGTCTTCTCAGAAGGCTTCAAAATCAAAGAAAGGTGCTCCACCTGTAGATTCAAAGAAACCTGCCAAACGACCAGATCTTAAGGCAATATCCAAGATGATGCAAAATAGTGAGATATTGTACTCTGAGAAAAGAATTGGCAACATTCCAGGTATTGAAGTTGGGTATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGTCACTGGTTGAATGGCATTGATTTTATGGGCCAGTCCTATGCCAAAGCGTATAACCTTGAATTTCCAATTGCTATTGCAATTGTTTTGTCGGGCATGTATGAGGATGACCAGGACAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGTCATAATTTGACTGGTGATAAGCGTCAAATTCGGGATCAAAAGTTGGAGCGTGGGAACCTGGCTCTCAAGAATTGTGCGGAGCAATGTGTGCCTGTTAGAGTGATTCGAGGTCATGATTCTTCAAGTAGTTACTCTGGGAAAGTATACACTTATGATGGCTTGTACAAGGTTGTCAATCATTGGTCGGAGACAGGGATAGCTGGATTTAAAGTCTTCAAGTTTCGACTTAGGAGGCTTGAAGGGCAACCTACATTAACCACGAATCAGGTATTTTTTACTTATGGACGTGTACCTCAATCTATAGCAGAAATACGAGGATTGGTTTGTGAGGATATCACTGGAGGTCAAGAAGATATACCCATTCCAGCTACAAATGTGGTAGACGATCCCCCTGTTCCACCCACAGGTTTCACATATTGCAAGTCTCTTAAGGTAGCAAAAAATGTGAAGCTTCCCACTAATGCCACTGGATGCAATTGCAAAGGATCCTGTAATGACCCAACAACATGTGCATGTGCTTTGCGCAATGGCTCTGATTTTCCCTATGTATCTCGGAATGGTGGCAGGTTAGTAGAAGCTAAAGATGTCGTATTTGAATGTGGTCCCAAATGTGGTTGTGGTCCAGGTTGTGTCAACCGAACTTCTCAAAAAGGAATTAGATATCGTCTGGAGGTTTTCCGGACTGCCAAAAAAGGATGGGCTGTCAGATCCTGGGATTTTATTCCTTCTGGAGCACCAGTTTGTGAGTACACAGGAATACTTGGTAGAACAGAAGACATGGATATCGTGTTGGAAAACAACTATATTTTTGAGATAGATGCTTTGCAAACGATCAAGGGCCTTGGTGGTAGAGAGAGGAGGTCACAAGATGGAGAGATTCCTGAAGATATTTTGAACAAATATGATGATCTAAGTTCCGAAAGTGTGCCAGAGTTTTGTATTGATGCAGGATCTACTGGAAATATTGCTAGATTTATAAACCATTGTTGTGAGCCTAATCTGTTCGTTCAGTGTGTTTTGAGCACACACGATGATTTGAGGTTGGCTCGGGTCATGCTGTTTGCTGCGGACAACATACCTCCTTTGCAGGAATTAACGTATGACTATGGTTATGCTCTGGATAGCGTGTTGGGCTCTGATGGGAAGATCAAGCAAATGCCATGCTATTGTGGAGCCGCAGACTGCAGGAAGCGATTGTTCTAA 2124 0.427 MVAQALDLVDQPLMVSTRGEDSVNSNSSVTNGVNGDTDLKKLKKSKVSPTTPRRSSARIQALQKTEKTLAGPNAIVVKEKDKCQDNVKEEKGKKRSRKSGAGESLVVEEASVEEESVLLLKKKPSACDKDDIKPENAVGQSGDKSDTVKVKDTIRLFNKHYLQFVQEEEKRCGKVETQPKDANTSKKSSQKASKSKKGAPPVDSKKPAKRPDLKAISKMMQNSEILYSEKRIGNIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDFMGQSYAKAYNLEFPIAIAIVLSGMYEDDQDNAEDVVYTGQGGHNLTGDKRQIRDQKLERGNLALKNCAEQCVPVRVIRGHDSSSSYSGKVYTYDGLYKVVNHWSETGIAGFKVFKFRLRRLEGQPTLTTNQVFFTYGRVPQSIAEIRGLVCEDITGGQEDIPIPATNVVDDPPVPPTGFTYCKSLKVAKNVKLPTNATGCNCKGSCNDPTTCACALRNGSDFPYVSRNGGRLVEAKDVVFECGPKCGCGPGCVNRTSQKGIRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILGRTEDMDIVLENNYIFEIDALQTIKGLGGRERRSQDGEIPEDILNKYDDLSSESVPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHDDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGSDGKIKQMPCYCGAADCRKRLF 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01219 707 MobiDBLite consensus disorder prediction 78 102 - -
Viun1g01219 707 MobiDBLite consensus disorder prediction 49 67 - -
Viun1g01219 707 SMART G9a_1 228 389 IPR003105 -
Viun1g01219 707 SMART set_7 528 683 IPR001214 GO:0005515
Viun1g01219 707 MobiDBLite consensus disorder prediction 17 35 - -
Viun1g01219 707 MobiDBLite consensus disorder prediction 1 107 - -
Viun1g01219 707 Pfam SAD/SRA domain 232 389 IPR003105 -
Viun1g01219 707 ProSiteProfiles Pre-SET domain profile. 463 525 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun1g01219 707 SMART preset_2 416 512 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun1g01219 707 ProSiteProfiles Post-SET domain profile. 691 707 IPR003616 -
Viun1g01219 707 SUPERFAMILY PUA domain-like 215 407 IPR015947 -
Viun1g01219 707 Pfam SET domain 539 677 IPR001214 GO:0005515
Viun1g01219 707 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 53 707 IPR025794 GO:0016571
Viun1g01219 707 SMART PostSET_3 691 707 IPR003616 -
Viun1g01219 707 MobiDBLite consensus disorder prediction 170 214 - -
Viun1g01219 707 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 24 700 - -
Viun1g01219 707 ProSiteProfiles YDG domain profile. 233 385 IPR003105 -
Viun1g01219 707 Gene3D SET domain 411 707 IPR046341 -
Viun1g01219 707 ProSiteProfiles SET domain profile. 528 677 IPR001214 GO:0005515
Viun1g01219 707 Gene3D - 216 400 IPR036987 -
Viun1g01219 707 MobiDBLite consensus disorder prediction 198 213 - -
Viun1g01219 707 SUPERFAMILY SET domain 412 683 IPR046341 -
Viun1g01219 707 Pfam Pre-SET motif 420 520 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01219 Viun-Chr1 22388545 22400656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01219 219 707 EF-hand Containing Proteins AT5G13960 66.329 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun1g01219 SAD_SRA 7.7e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01219 K11420 - gmx:100795584 1059.28