Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01199 ATGGCTATCTCCGACTCTTCTTCTGGCCGCAACTCTCTCATCCCCTCCTTCCTCTACTCCTCTTCCTCCAAGACGCTTCCACTCCACCGTATGCTCCACTCCACCGCCGCCGCAGCCGCCGCCGCACCTTCGGCACCGCCGGCAAACCTCGATGCCGGATCGCGTGGCATCATGATTCCCTCTCCTAGCGAGTCACGCAAGATCGAGCTGTACTCTCCCGCCTTCTACGCCGCCTGTACTGCCGGTGGAATCCTCAGCTGTGGCCTTACTCACATGGCCGTCACTCCTCTTGACCTTGTCAAGTGTAATATGCAGATCGACCCTTCTAAGTACAAGAACATCACGTCTGGATTTGGGGTTTTGCTTAAGGAGCAGGGCTTCAGGGGATTTTTCCGTGGTTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTCGGATTCTACGAGTTCTTTAAGAAGTATTATTCTGATATTGCTGGCCCAGAGTATGCTAGCAAGTACAAGACCTTGATTTACCTTGCTGGTTCCGCTTCTGCTGAGGTTATTGCTGATGTTGCTCTTTGCCCCTTTGAGGCTGTGAAGGTCCGTGTCCAAACACAGCCTGGCTTTGCTAGGGGTTTGGCAGATGGGCTCCCAAAATTTGTGAGATCTGAAGGAACCTTGGGGCTGTACAAGGGAATAGTGCCTTTGTGGGGACGACAGATTCCATACACAATGATGAAGTTTGCTTCATTTGAGACCATAGTGGAGCTTATCTATAAGCATGCCATTCCTACACCAAAGAATGAGTGCAGCAAAAACCTGCAACTCGGTGTCAGTTTTGCTGGTGGATATATTGCTGGTGTGCTTTGTGCAATCGTGTCTCATCCTGCTGATAATCTTGTCTCTTTCCTGAACAATGCTAAAGGAGCAACAGTTGGTGATGCGGTGAGTAAGCTTGGTTTGTGGGGTCTCTTCACCCGTGGTCTTCCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCCCAATGGGGAATATATGATGCTTTCAAAGTCTTTGTTGGGCTGCCAACAACTGGTGGTCCTGCTCCTGCTGCTGCTCCAGCTGCAGCTCCTGATTCTGGGCTAGCAAAGGCGTAA 1134 0.5115 MAISDSSSGRNSLIPSFLYSSSSKTLPLHRMLHSTAAAAAAAPSAPPANLDAGSRGIMIPSPSESRKIELYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPSKYKNITSGFGVLLKEQGFRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVRSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKNLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVSKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAAAPDSGLAKA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01199 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 158 IPR018108 -
Viun1g01199 377 Pfam Mitochondrial carrier protein 77 160 IPR018108 -
Viun1g01199 377 Pfam Mitochondrial carrier protein 173 259 IPR018108 -
Viun1g01199 377 Gene3D Mitochondrial carrier domain 74 352 IPR023395 -
Viun1g01199 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 255 IPR018108 -
Viun1g01199 377 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 44 362 IPR044677 GO:0005315|GO:1990547
Viun1g01199 377 SUPERFAMILY Mitochondrial carrier 77 347 IPR023395 -
Viun1g01199 377 FunFam Phosphate carrier protein, mitochondrial 74 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01199 Viun-Chr1 21825874 21828929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01199 7 368 Chloroplast and Mitochondria Gene Families AT5G14040 77.236 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01199 K15102 - gmx:548006 668.307