Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01146 ATGGAAGTGTTTAACCCAGTTGAAGGCAAGACCTATAAGCTCCCTGTTGGGTACAGGTTCGACCCCACCGATCCAGTTCTCGCAGGCTACTACCTCACGAAGAGGCTCAGGGGACACCCTCTCCCCAATGGACTCATTCTAGACTATGATGTTCACCAGACTGAGCCTTGGGAGCTCCCAGGAGGTGGGAAGTTCATGAATTGGCAGAAGTTTTTCTTCTACAATGTGAAGGGCCTAAACCCTGAGAAGAGAGATGCTGGGAAAGGGCAATGGGAAATGGTGGAGAAAGATGAAGAGGTTGAGTTTTATGACGAACAACTCGCACCACTCACTGCGAAGAAGAGTGTTCTGGTTTTCTGGAAATCCAAGGGTAACTCTCTTGCCAAAACAAAATGGGTGATGCATGAGTTTCGTCTTGCCCTAAAGTCAAATCCATCAAAGATGTCAGCCATGGGTGTGTGCCGCATATTCGAGAGGAAAACTTCAAAGCGGGCAAAGAGAGCAAGAGTGAGTACTGAAGGGGTGAGCAATGCTGAAGAAGCTATGGAAGTCATTGATTTCACAGTGGAGTGTGGCACTGAGACTAGTCCTCCTCCTCCTCCTGGGACCCCCTAG 615 0.4911 MEVFNPVEGKTYKLPVGYRFDPTDPVLAGYYLTKRLRGHPLPNGLILDYDVHQTEPWELPGGGKFMNWQKFFFYNVKGLNPEKRDAGKGQWEMVEKDEEVEFYDEQLAPLTAKKSVLVFWKSKGNSLAKTKWVMHEFRLALKSNPSKMSAMGVCRIFERKTSKRAKRARVSTEGVSNAEEAMEVIDFTVECGTETSPPPPPGTP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01146 204 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Viun1g01146 204 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Viun1g01146 204 PANTHER NAC TRANSCRIPTION FACTOR 56 14 172 - -
Viun1g01146 204 ProSiteProfiles NAC domain profile. 14 159 IPR003441 GO:0003677|GO:0006355
Viun1g01146 204 SUPERFAMILY NAC domain 11 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01146 Viun-Chr1 20856718 20858172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01146 14 159 NAC Transcription Factor Family AT2G24430 33.987 2.71e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun1g01146 NAM 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01146 - - vum:124846897 310.071