Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun1g01142 | ATGGGTAGTAGCTGCCCTTGTTTCGGGTCGAGGAAGAAGGGCAAAGAGAAGAGTGTCAAGGGACGGGACGAGGAAAACAAGAATCGCAAATCTGTAAAGAACACCAATGATGTCTCTGAGAGTTCTCCAGGAAATGGACCAGAAGAAAACCCAATAGAGGATGGAGAAAGTTCTCATAAGGCTCGGATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAAAGTTTTAGAGATGAAACCTTTATTGGGCAAGGTGGATTTGGCATTGTTTACAAGGGAATAATTGGGGAAAATCAGGTTGTAGCTGTTAAAAGACTTGATACTACAGGTGTGCAAGGGGAGAAAGAATTTCTGGTGGAAGTTCTCATGCTTTCCCTTCTACGCCATCCCAACCTGGTTAATATGATTGGTTACTGTGCTGAAGGGGATCAACGTCTTCTTGTGTATGAATACATGGCTTTGGGATCCCTAGAATCTCATCTTCATGATGTTTCTCCTGATGAAGAGCCACTTGATTGGAATACCCGAATGATAATAGCTTGTGGGTCAGCAAAAGGGCTACATTATCTGCACGATGAAGCAAAGCCTTCTGTTATATACAGGGATCTTAAAGCATCCAATATACTATTGAATGAAGATTTCCTTCCAAAACTTTCTGATTTCGGGCTTGCAAAATTTGGTCCAACCGGAGATCAATCATATGTTGCCACTAGGGTCATGGGAACACAAGGTTACTGTGCCCCTGAATATGCCACTAGTGGAAAATTAACGAAGAGATCTGACATATACAGTTTTGGGGTTGTGTTACTGGAACTAATTACTGGACGCAAAGCATATGATGATAACCGTGGCCCTGAAAAGCTTCTGGTAGACTGGGCACGTCCAATGCTGAGAGACAAAAGGAGTTTCCCAAGATTGGTGGATCCACGGCTTCAAGGGAAGTACCCAGCATCATGTCTACCGATGGTGATTGAATTGACCGCCATGTGTCTTCGTGAAGAGCCACGTCAACGGCCTAATGCAGGTGATATAGTGCAAGCTCTGGAATTCTTGTCATCCAAGCAATACTCCCCAAAAGCGCTCAACACAGTGAACAACACAACTGAGATGGAGAGTGCAGTGTCCCCAAATGAAACAACACCCATTTTTCCAAAAGAATCACTGAGAGAGCGAGCTGTTGCAGAAGCCAAGCTCTGGGGGGAGACATGGAGGCAGAAACGACAAAGCGAGCAAAACAGTCCTAAGGAACCACAGGGGTTGTGA | 1263 | 0.4473 | MGSSCPCFGSRKKGKEKSVKGRDEENKNRKSVKNTNDVSESSPGNGPEENPIEDGESSHKARIFTFRELATATKSFRDETFIGQGGFGIVYKGIIGENQVVAVKRLDTTGVQGEKEFLVEVLMLSLLRHPNLVNMIGYCAEGDQRLLVYEYMALGSLESHLHDVSPDEEPLDWNTRMIIACGSAKGLHYLHDEAKPSVIYRDLKASNILLNEDFLPKLSDFGLAKFGPTGDQSYVATRVMGTQGYCAPEYATSGKLTKRSDIYSFGVVLLELITGRKAYDDNRGPEKLLVDWARPMLRDKRSFPRLVDPRLQGKYPASCLPMVIELTAMCLREEPRQRPNAGDIVQALEFLSSKQYSPKALNTVNNTTEMESAVSPNETTPIFPKESLRERAVAEAKLWGETWRQKRQSEQNSPKEPQGL | 420 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun1g01142 | 420 | SMART | serkin_6 | 76 | 351 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g01142 | 420 | PANTHER | OS07G0668900 PROTEIN | 24 | 360 | - | - | |
Viun1g01142 | 420 | Gene3D | Transferase(Phosphotransferase) domain 1 | 152 | 374 | - | - | |
Viun1g01142 | 420 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Viun1g01142 | 420 | MobiDBLite | consensus disorder prediction | 400 | 420 | - | - | |
Viun1g01142 | 420 | Pfam | Protein kinase domain | 77 | 346 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g01142 | 420 | Gene3D | Phosphorylase Kinase; domain 1 | 48 | 151 | - | - | |
Viun1g01142 | 420 | CDD | STKc_IRAK | 82 | 349 | - | - | |
Viun1g01142 | 420 | ProSiteProfiles | Protein kinase domain profile. | 76 | 351 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g01142 | 420 | ProSitePatterns | Protein kinases ATP-binding region signature. | 82 | 104 | IPR017441 | GO:0005524 | |
Viun1g01142 | 420 | SUPERFAMILY | Protein kinase-like (PK-like) | 55 | 351 | IPR011009 | - | |
Viun1g01142 | 420 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 198 | 210 | IPR008271 | GO:0004672|GO:0006468 | |
Viun1g01142 | 420 | FunFam | Serine/threonine-protein kinase PBS1 | 152 | 367 | - | - | |
Viun1g01142 | 420 | FunFam | probable serine/threonine-protein kinase RLCKVII | 48 | 151 | - | - | |
Viun1g01142 | 420 | MobiDBLite | consensus disorder prediction | 10 | 34 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun1g01142 | Viun-Chr1 | 20614823 | 20618994 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun1g01142 | 4 | 404 | Glycoside Hydrolase | AT3G07070 | 51.064 | 2.29e-134 | 390 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Viun1g01142 | Pkinase | 6.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun1g01142 | K13430 | - | gmx:100805675 | 650.203 |