Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01137 ATGGAGAATAATAACAACGCCGGTGACACGCTTAATCCTCCTGGTGGTGCCGCCGCTCAAGCGAATACGTTGTCCCCGACGCGGCATGGTCAGGCGGAGGAGGAACATAAGAAAGAAGAAGCCGCCGCGTCTACTCCGCCAAGCCTCGAGAAACTTGCTCAAGAGATTGACCAATTCGCAAGGAGACTAAGAACCGATGGAAATGCGAACAACTTTGAGATTCCTGACTTCACTGAGAGGTACTTGGATCTCGTTGAAGAGAAGATAATGAAATACGACGCGGGTGAAGGTAAACCGAGATGGGGTGAGGTGTCGGAGGAAGATTCGTGGTTGTTGAACAACGCGAACAGGTTTTCAAAACTGATGACATTGGTGACTGGAAATTATCGTGATCATGAACCGGAGAAGATCAGCGGTGCACAAGTCTCGATGATGAACCGCATTTCCTCAATCCACCAGCGTTTGATGACGTATTTGGAGGAGGACTTCCGGTTTCTGATGGAAGAAACAAGAATCCCAACCGAATTGGATCCCGGAGGATATAATCAGAACAGCTTCGATACCAAAGGAAAACAACACATGGCGGCATTTGAACAGCAAGAGGTGGCGCAAGAACAAGATGGTTTTGAACAAGACACGAATTTCCCGGGGTACTCGGAGGAGACAATGGCCGGCCTAAGCAAGATCGCCAGCGAGATGTTATTCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTACATAATCTCGCGGAGGAGCGCCTTCGAGGAGATTAACCAGAAGCTAGGGTTAGAGAAGATCAGCATCGACGAGATGGTGACGAAGATGCAGTGGGAGACGATGGCCAGGGACATGATCCCCGCCTGGATCAACACGCTGAAGCAGTACGCGGCAGTGTACTTCCCCGGCGAGAGGAAGCTGACCGAGACCGTGTTCACAAACAACCACGCCGTGGCGGTGGGACTCTTCAGCAGCCTCTCCCGCGGCGTTGTGATTCAGCTTCTGAACTTCGCGGAGGGCGCCGCCATGACGAAGCGAGCCGGAGAGAAGCTCTTCAAGCTCCTGGACATGTACGAGGGCCTCTACGAGGTGATCCCCAGCGTGGCCAGACTCTTTCCAGAGGAGTCCAGCGAGGAGATAAAGACAGAGATGAACCATGCCAGGTCCAGACTTGGGGAGGCATCCATCCACATCTTCTGCGACCTAGAGAACCAGATTAAATCGGAGACAGCGAAAAGCGCCGTCCCAGGTGGCGCAGTGCACCCCCTCACACGCTACATCATGAACTATCTAAACATAGCAGGGGACTACAAGAAAACATTAGAGCAGGTTTTCATGGAGCACACGAAGAGGGACCGTGCGGGTTCCACAAGCAAGAATGCAGAGCAGAAGAATGAGGAAACACCGTCTCCATTCGCAAAACAGGCGTTGAGGGTGATGGACCTGCTAGACTCGAGCCTGGAGGGGAAGGCGCGTCTGTACAAAGAGGTGGCGCTGAGCAACTTCTTCATGATGAACAATGGGAGGTACATGCTGCAGAAGATAAAGAGTTCTAGCGAGATGAGCAAGGTGATGGGCGACAACTGGATCAGGAAGAAGTCCTCGGAGCTGAGAAACTACCACAAGAACTACCAGAGGGAGACGTGGAACAGGGTGCTGCAGTGTCTGAGCCACGAAGGGTTGGCCGTGAATGGGAAGGTTCACAAGCCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAACTCTTTGTTCGACGATATTCTCAAGACGCAGAGCTCGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTGAGGGTTTCCATCTCTGCAGTGATTATCCCTGCATACCGATCATTCGTTGCGAGGTTCGCCCAGACTTTTGACCCAGGGAGACAGACAGAGAAGTATATAAAGTACCAAGCTGAAGACATTGAGACTTACATTGATGAGTTGTTTGAAGGGAAGCCTCACCAGTCAATCGGAAAAAGGAGAACATAA 1995 0.5213 MENNNNAGDTLNPPGGAAAQANTLSPTRHGQAEEEHKKEEAAASTPPSLEKLAQEIDQFARRLRTDGNANNFEIPDFTERYLDLVEEKIMKYDAGEGKPRWGEVSEEDSWLLNNANRFSKLMTLVTGNYRDHEPEKISGAQVSMMNRISSIHQRLMTYLEEDFRFLMEETRIPTELDPGGYNQNSFDTKGKQHMAAFEQQEVAQEQDGFEQDTNFPGYSEETMAGLSKIASEMLFGGYESECCQVYIISRRSAFEEINQKLGLEKISIDEMVTKMQWETMARDMIPAWINTLKQYAAVYFPGERKLTETVFTNNHAVAVGLFSSLSRGVVIQLLNFAEGAAMTKRAGEKLFKLLDMYEGLYEVIPSVARLFPEESSEEIKTEMNHARSRLGEASIHIFCDLENQIKSETAKSAVPGGAVHPLTRYIMNYLNIAGDYKKTLEQVFMEHTKRDRAGSTSKNAEQKNEETPSPFAKQALRVMDLLDSSLEGKARLYKEVALSNFFMMNNGRYMLQKIKSSSEMSKVMGDNWIRKKSSELRNYHKNYQRETWNRVLQCLSHEGLAVNGKVHKPVLKERFKSFNSLFDDILKTQSSWVVKDEQLQSELRVSISAVIIPAYRSFVARFAQTFDPGRQTEKYIKYQAEDIETYIDELFEGKPHQSIGKRRT 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01137 664 MobiDBLite consensus disorder prediction 29 44 - -
Viun1g01137 664 Gene3D Exocyst complex component Exo70 105 660 - -
Viun1g01137 664 Pfam Exo70 exocyst complex subunit 287 649 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun1g01137 664 MobiDBLite consensus disorder prediction 448 469 - -
Viun1g01137 664 MobiDBLite consensus disorder prediction 1 50 - -
Viun1g01137 664 MobiDBLite consensus disorder prediction 1 28 - -
Viun1g01137 664 SUPERFAMILY Cullin repeat-like 118 652 IPR016159 -
Viun1g01137 664 PANTHER EXOCYST COMPLEX PROTEIN EXO70 80 653 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01137 Viun-Chr1 20511356 20513918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01137 40 664 EXO70 exocyst subunit family AT5G13990 48.160 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01137 K07195 - gmx:100820172 902.894