Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01128 ATGATCAATTCACTTTGTGGAACCCTCAAGAGTGAGAACAACTCTAGAACCAAAGTCCAACCCACATCTTCAAATGAGTCAAAGAAAAATGCCACTGAATCCTCTGGTGATCTTGACCAAACTGGCCTAACACCACCAAGCTTAAACCTTCCTGCACTGAAATTTGAGTTGGATGGAGATGTGGAAGTTCAGTCACCAGATAGTTCAATGTGGGAATCCTTTTTTGCTGACCAACTAGATGCTGATTTCATGATCTCTTCCCCAGTCAGGAACGTTCCCTCCCCGCAACTCTCTTCCTACAATTGCAGCTATAACTATGCTCATGGAATGCAAGGCCAGACTCTCTCAGGGTGTTCCCCACCAAGGTTTTCATCATCCCAGATTGGACCCTTCAACACCACCCACAAAGGGAAAGGACTTAGCCCTCTCCACAGGGTCTTCAACTCACCCAACAATCAGTACATGCAGCATGTTGAAAACCTTTCCCTCCCAGCAATAGAAGAGTTCTTGGAGGATTATCAAGGCTATTCCTCAACCAAGGTGTCTTCTGACATTGCAACTTCATCTGAATGCTTTGACTTGTCTTCTCAAATCTCATCCTCCATGTTGGATAGCTTGACACTGCCCAATTCCTCAAGGTACCATGGTTCAGTCGATGAAGAATCCTCAGTCCAAGAGAGTGACATCTATCATCAGATGGGGTCCATGGCTAGTGCATCCCTCTCACAGGCTCTGCAACAAGAACGCTACCAAGAGAAACGGCAAAAGCAGCATCAACAACAACAACAACGTCAGCAAGACAATCTCATGGTGCCTATTCCAATCGGAATCGAGCAGGAGCAAGATAGCGGCCTTCAACTGGTGCACCTGCTTCTGGCGTGCGCAGAGGCAGTGGCTAAAGAGGAATACATGTTAGCAAGAAGGTACCTCCACCACCTCAACCGAGTCGTCACTCCCTTAGGCGACTCCATGCAGCGCGTGGCGGCGTGCTTCACCGACTCGCTCAGCGCTAGGCTCAATGCCACCCTCACTCCGAAACCCTCCAAACCCATCAGCCCCTCAAACTCCATGGAAGTCCTCAAAATCTACCAGATCGTGTACCAGGCCTGCCCCTACGTCAAGTTCGCTCATTTCACCGCCAACCAGGCAATCTTCGAAGCCTTCGAAACCGAAGAGCGCGTCCACGTCATCGACCTCGACATCCTCCAGGGATACCAATGGCCCGCCTTCATGCAGGCCCTCGCCGCCCGCCCCACCACCGCTCCCTTCCTCCGCATTACCGGAGTTGGCCCCTCTCTCGACGCCGTCCGCGAAACCGGCCGCTGCCTTACCGAGCTCGCCCACTCCCTGCGCATCCCCTTCGAATTCCACGCCGTTGGAGAACAGCTCGAGGATCTCAAACCCCACATGCTGCACCGCCGTGTCGGGGAGGCTCTCGCTGTTAACGCAGTCAACCGCCTCCACCGCGTGCCCGGGAATCACCTCGGGAACCTTCTCAGCATGATACGCGACCAGGCGCCGAACATAGTGACCCTGGTGGAGCAAGAGGCTAGCCACAACGGACCCTACTTTCTGGGCCGGTTTCTCGAGGCGTTGCACTACTACTCGGCGATCTTCGACTCGCTGGACGCGACGTTTCCGGCGGATTCGGCGCAGCGGGCGAAGGTTGAGCAGTACATATTCGCGCCGGAGATAAGGAACATCGTGGCGTGCGAGGGCCCGGAGAGGTTTGAGCGGCACGAGAGGCTGGAGAAGTGGCGGAAGATAATGGAGGGGAAGGGGTTCAAGGGCGTGGCACTGAGTCCGAACGCGGTGACTCAGTCGAAGATTTTGCTCGGGTTGTACTCCTGTGAGGGGTATAGGTTGACGGAGGATAAGGGCTGCTTACTGCTTGGGTGGCAGGATCGGGCCATCGTTGCGGCGTCTGCATGGCGGTGTTGA 1941 0.5435 MINSLCGTLKSENNSRTKVQPTSSNESKKNATESSGDLDQTGLTPPSLNLPALKFELDGDVEVQSPDSSMWESFFADQLDADFMISSPVRNVPSPQLSSYNCSYNYAHGMQGQTLSGCSPPRFSSSQIGPFNTTHKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQGYSSTKVSSDIATSSECFDLSSQISSSMLDSLTLPNSSRYHGSVDEESSVQESDIYHQMGSMASASLSQALQQERYQEKRQKQHQQQQQRQQDNLMVPIPIGIEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTDSLSARLNATLTPKPSKPISPSNSMEVLKIYQIVYQACPYVKFAHFTANQAIFEAFETEERVHVIDLDILQGYQWPAFMQALAARPTTAPFLRITGVGPSLDAVRETGRCLTELAHSLRIPFEFHAVGEQLEDLKPHMLHRRVGEALAVNAVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPADSAQRAKVEQYIFAPEIRNIVACEGPERFERHERLEKWRKIMEGKGFKGVALSPNAVTQSKILLGLYSCEGYRLTEDKGCLLLGWQDRAIVAASAWRC 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01128 646 MobiDBLite consensus disorder prediction 241 267 - -
Viun1g01128 646 MobiDBLite consensus disorder prediction 10 47 - -
Viun1g01128 646 Pfam GRAS domain family 287 645 IPR005202 -
Viun1g01128 646 ProSiteProfiles GRAS family profile. 278 645 IPR005202 -
Viun1g01128 646 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 239 640 IPR005202 -
Viun1g01128 646 MobiDBLite consensus disorder prediction 10 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01128 Viun-Chr1 20384706 20386758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01128 250 646 GRAS Transcription Factor Family AT1G66350 42.432 3.31e-101 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun1g01128 GRAS 3.3e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01128 - - gmx:100775374 1045.8