Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01123 ATGTCTGTTATCCAAAAACACACCCACTCCTTACAAGAACTCAACCCGGAGAAGGAAAACTGGAATATCATTGCAAGAGTGGTAAGGTTATGGTTTGTTGAAGATTGCACAAAAGGAAAATCTCCATTTTCCATGGAAATTGTTCTTCAAGACAAAGAGGGTGTCCTAATCCATGCATCTGTTAGACGCACATTGATATACAAATTTCAGACTGAAATCAAAGAGGATAAGGTTTACACCATTCAATCTTTTAGTGCTTCATGTAGTGGTGGTTCTTATAGAACTACAAATCACGCCTATAAGATCAACTTCCAATTTGGAACCAAGGTCAATATGGTTGAAAGTACCTTAGTTCCGAAAACTAGAACTACATACACCCCTTTTTCAACCATCAAAGCTACTGGTTTTGACACAGATTACTTAGTTAAGAGAGAGCTAGAGAAAGGTGGTAAGAAGACCAAAATGAATGCCATCCTTATTGAAGCTGATGGTTTGCGACTAGAGTGTACTTTATTTGGTCAATATGTTGATATGTTAAATGTATTTTTAGCCTCCGGAGAGGATCAACATGTTGTCATTGCTTTACATTTTTGCAAAGTGAAGACCTTCCAAGATAAAGTTTCTATTCAAAACTGTACGAACTGTACGAAGATAATTTTTAACTGTGATGGTGAAGATGCAACGAAGTTGAAAAAAATGTATAAACTTAAACTTCGTGTAATTGATGCTACGAATTCTACAATTTTTGTTGTATTTGATCGTGATGCAAGTGCAATGTTGAAGAAATCATGCTCTGATATTCTTGACTTACAAGACAAGGAATCGTTGAATAATAAAGCTGTAATTGATGTTGAAATTGATGAGTTAACCCGCAAAGAATCATCTCATCTGGACAATCTTGACTTGGCTACTCAACCACCTCTTCCAGCACTTAAAAGACAGATTCGATCTATGGTTCAAAAAAATAAGAAGATTCCAGTGAAGATGTTGAAGAAGAATATCAAGAATGAAAAGTGA 1017 0.3559 MSVIQKHTHSLQELNPEKENWNIIARVVRLWFVEDCTKGKSPFSMEIVLQDKEGVLIHASVRRTLIYKFQTEIKEDKVYTIQSFSASCSGGSYRTTNHAYKINFQFGTKVNMVESTLVPKTRTTYTPFSTIKATGFDTDYLVKRELEKGGKKTKMNAILIEADGLRLECTLFGQYVDMLNVFLASGEDQHVVIALHFCKVKTFQDKVSIQNCTNCTKIIFNCDGEDATKLKKMYKLKLRVIDATNSTIFVVFDRDASAMLKKSCSDILDLQDKESLNNKAVIDVEIDELTRKESSHLDNLDLATQPPLPALKRQIRSMVQKNKKIPVKMLKKNIKNEK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01123 338 Gene3D - 118 245 IPR012340 -
Viun1g01123 338 SUPERFAMILY Nucleic acid-binding proteins 8 114 IPR012340 -
Viun1g01123 338 CDD RPA1_DBD_A_like 23 110 - -
Viun1g01123 338 CDD RPA1_DBD_B_like 148 226 - -
Viun1g01123 338 Pfam Domain of unknown function DUF223 46 141 IPR003871 -
Viun1g01123 338 Gene3D - 6 112 IPR012340 -
Viun1g01123 338 SUPERFAMILY Nucleic acid-binding proteins 147 241 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01123 Viun-Chr1 20279447 20282121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01123 3 234 Core DNA Replication Machinery Family AT5G08020 22.605 2.34e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01123 - - vun:114163676 423.32