Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01108 ATGACCACCGCTTTAAAGCCACCAATTGGGTTGCGCCCCCTCCAACCACCACCGCTTTTCCCTGTTTCCAAATCGCTAAAGTTCCCAACAACTCAGCTTCCCAGAATCAACTGTAGCCACTCCTCTTTCGAAGTTCGAGAGGTTAGCTATCAACCCCCGGGGACTCAGCTTAAACTTCTAAATTCAGTTAGCTTTTCACTTCCAGAGAAAAGTTTTGGCCTAATTTTTGGACAGAGTGGAAGTGGAAAAACAACCCTATTGCAGCTTCTTGCAGGTATATGCAAACCAACCTCGGGATCTATTTACATCCAAAAGTATGGGAATGACGGAAATCCTAGTCAAACTCCAGAGCCCTTGGTGCCAGAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTATTTTGTGGCAGATAATGTGCTTGATGAAGTCACTTTTGGTTGGCCAAGGCAAAAGGGTAGCCATCACCTTAGGGAGAATCTTACTCTAGGGCTACAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATATCATTGGATAAAAATCCTCACTCCCTCAGTGGTGGTTACAAACGCCGTCTTGCCTTGGCAATACAATTGGTGCAAACCCCTGATCTATTGATATTGGATGAACCTCTTGCTGGACTCGAGAATTTGCAAGTCTAG 666 0.455 MTTALKPPIGLRPLQPPPLFPVSKSLKFPTTQLPRINCSHSSFEVREVSYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGICKPTSGSIYIQKYGNDGNPSQTPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGSHHLRENLTLGLQRAINWVGLSGISLDKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLENLQV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01108 221 Pfam ABC transporter 60 214 IPR003439 GO:0005524
Viun1g01108 221 PANTHER HEAVY METAL TRANSPORTER 44 216 - -
Viun1g01108 221 CDD ABC_cobalt_CbiO_domain1 44 216 IPR015856 GO:0005524|GO:0016020|GO:0055085
Viun1g01108 221 Gene3D - 31 220 IPR027417 -
Viun1g01108 221 FunFam ABC transporter I family member 11 chloroplastic 32 219 - -
Viun1g01108 221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 217 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01108 Viun-Chr1 19852851 19864020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01108 44 218 Calmodulin-binding Proteins AT2G36910 26.064 4.49e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01108 - - vun:114196181 432.565