Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01104 ATGGAGAATTATAGCATGTTGTTCCCTTGTCCCAATTCTTCCAGCTACCCCATTTCAACGAGTGCTGTGGGAACCTCTCAGCATGGTTTTGGTGGTCAAAGCTCCAATGCATTCCTAGGACTAAGGCCTAGTAATGAGAGTAGTGGCAGTGATCATGAAAAGAGAGGAGAAGAAGCTGGTAGAGATGCTGCCATGTTAATGTCTCAGATCAGTAGTGGTGGCATTAATGTGAGTGATGAGTTAGGTGGTTTGGGAAATGGTGGTAATAGTAATGGCAAAAAGAAAGGGGAGAAAAAGGTTCGAAAGCCTAGATATGCTTTCCAAACAAGGAGCCAGGTTGATATTCTTGATGATGGTTATCGGTGGAGGAAGTACGGCCAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGTTACTACCGGTGCACGCATCAAGGGTGCAATGTGAAGAAACAAGTCCAACGCCTAACGAAAGACGAAGGGGTAGTGGTGACTACTTACGAAGGAGTTCACACTCACCCAATTGAGAAGACAACAGATAACTTTGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA 588 0.4354 MENYSMLFPCPNSSSYPISTSAVGTSQHGFGGQSSNAFLGLRPSNESSGSDHEKRGEEAGRDAAMLMSQISSGGINVSDELGGLGNGGNSNGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01104 195 ProSiteProfiles WRKY domain profile. 111 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g01104 195 SMART WRKY_cls 116 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g01104 195 Pfam WRKY DNA -binding domain 117 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g01104 195 FunFam WRKY transcription factor 57 102 176 - -
Viun1g01104 195 MobiDBLite consensus disorder prediction 16 59 - -
Viun1g01104 195 MobiDBLite consensus disorder prediction 77 102 - -
Viun1g01104 195 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 178 IPR044810 GO:0003700
Viun1g01104 195 SUPERFAMILY WRKY DNA-binding domain 108 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g01104 195 MobiDBLite consensus disorder prediction 16 46 - -
Viun1g01104 195 Gene3D WRKY domain 100 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01104 Viun-Chr1 19722611 19724816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01104 104 195 WRKY Transcription Factor Family AT5G13080 88.043 5.56e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun1g01104 WRKY 1.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01104 - - pvu:PHAVU_001G088200g 345.125