Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01087 ATGGGGGTCTTACAGGAAAAGCTGTCCTTGTTCTATAAGAGCCGATGGCTTGTGTTCGTCGCCGCAATGTGGTTGCAGTCATGGGCGGGTATCGGCTACCTCTTCGGGAGCATATCGCCGGTAATCAAGAGCTCCCTCGGTTACAACCAGAAGCAGCTCGCCATGTTGGGTGTCGCCAAGGACCTCGGCGACGCCGTCGGCTTCATGACGGGGCTGCTCTGTGAGTTGTTACCTATCTGGGGTGCTCTTCTTGTCGGTGCTGCTTTAAATCTCATTGGTTATGGCTGGGTCTGGTTGGTTGTAACAGCTCAAGTTCCAGTTTTGCCTTTGTGGGCTATGTGTGTTCTTATCTTTGTGGGAACAAATGGTGAAACCTACTTCAACACAGTTTCTCTGGTGTCTTGTGTACAAAACTTCCCCAAAAGCCGGGGTCCTGTGGTGGGAATTCTAAAGGGCTTTGCTGGGTTGAGTGGTGCAATCTTGACACAGATATATGCATTGTTCCATGCCCCTGATCATGCATCATTAATCTTTATGGTTGCTGTTGGTCCTGCATTGGTAGGAATAGGTCTTATGTTCCTTGTTAGGCCTGTTGGGGGTCACAAACAAGTCCGGCCAACAGATGGAAAATGCTTCACATTTGTGTATGGTGTGTGCCTCCTATTGGCTGTTTATTTGTTGGGAGTCATGGTTGTCCAAGATCTAGTTCCAGTGAGTGAAACTGTAATCTCAATATTCACAATTATTCTCTTGCTGATCCTTGTTGTCCCAATTGTTATTCCCATTATATTGAGTTTTGGCCCTGAGGCAAGCAATCCAGAAGATGAGTTCCTTCTTCAAGAACCACATAATAAAGAAGCAGGGAAGTCTCAGATGGATTCTGATGAAGTAATATTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACATGCTCCCTGCATCAGAGAGGCAAAAACGTATAGCACAGTTACAACAAAGACTGCTTCAAGCAGCTGCAGAAGGAGCAGTGAGGGTTAAGAGGAGGAGAGGACCACACAGAGGGGAAGATTTCACCTTGACACAAGCATTGATCAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGATCATGGGTTCGGGATCCGGGTTGACTGTAATTGACAATCTGGGTCAGATGAGCCAATCTCTAGGATATGACAATGCACATATATTTGTCTCCATGGTCAGTATTTGGAACTTCCTTGGCCGTGTTGGAGGAGGTTACATATCTGAGCTTGTTGTGAGAGATTATGCATATCCAAGACCAATTGCATTGGCTGTATTTCAACTCATTATGACTGTTGGACATCTTTTCATTGGTATGGGATGGCCAGGGTCAATGTATGTTGGCACTTTGCTGGTTGGACTTGGTTACGGTGCTCATTGGGCAATTGTTCCAGCCACTGCCTCAGAGTTGTTTGGTCTCAGAAACTTTGGTGCACTCTACAATTTCATCACTCTTGCAAACCCTGCAGGAACATTGGTCTTCTCTAGTCTCATTGCCAGCACAATCTACGATTCTGAAGCAGAGAAACAACACCCCCAAAGTATGGGATCAATGCTGTTGCATTTACCAAATGCTGCTGCTGAGTCTCTCAAGTGTGAAGGGAGCGTATGCTTTTTCCTAACTTCCATGATCATGTCAGGATTGTGCGTTCTTGCAGCAGCGCTATGCACGGTTCTAGTGTTAAGAACAAGGATTGTTTATGCCAACTTATATGGAAAAACTTCTTCTAGTAGACTTCGATTATGA 1776 0.4555 MGVLQEKLSLFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLGYNQKQLAMLGVAKDLGDAVGFMTGLLCELLPIWGALLVGAALNLIGYGWVWLVVTAQVPVLPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALFHAPDHASLIFMVAVGPALVGIGLMFLVRPVGGHKQVRPTDGKCFTFVYGVCLLLAVYLLGVMVVQDLVPVSETVISIFTIILLLILVVPIVIPIILSFGPEASNPEDEFLLQEPHNKEAGKSQMDSDEVILSELEDEKPKEVDMLPASERQKRIAQLQQRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMVSIWNFLGRVGGGYISELVVRDYAYPRPIALAVFQLIMTVGHLFIGMGWPGSMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITLANPAGTLVFSSLIASTIYDSEAEKQHPQSMGSMLLHLPNAAAESLKCEGSVCFFLTSMIMSGLCVLAAALCTVLVLRTRIVYANLYGKTSSSRLRL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01087 591 SUPERFAMILY MFS general substrate transporter 11 202 IPR036259 -
Viun1g01087 591 CDD MFS_Mch1p_like 14 563 - -
Viun1g01087 591 Gene3D MFS general substrate transporter like domains 209 575 IPR036259 -
Viun1g01087 591 Coils Coil 315 335 - -
Viun1g01087 591 SUPERFAMILY MFS general substrate transporter 214 573 IPR036259 -
Viun1g01087 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 578 - -
Viun1g01087 591 Pfam Nodulin-like 15 262 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01087 Viun-Chr1 18815864 18819825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01087 5 586 Nodulin-like Gene Family AT5G14120 70.034 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01087 - - gmx:100796700 1024.23