Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01084 ATGGCGATGGAAGTGGAGCACAATCAGAATCAGCAGTTAGGGTTTCCGTTCTGGAAACCGCTCCGTCGCAAGTTCGGACCCGACTCTCCTTTCTTCGCTCCTGGCAACCTCGAACGGGAACTTCTTGCCAAACAGGTTGCTTTGGAATTGACAGAAGAGAAGGAACAGCTTGAGAAATGGATGCAAGAGGAGGAAGGAAGGGAAATCTTTTGTCCCATTGTTGGTTGTGGTGCACGCTTGACTTCAATGGATGACTTCGAGAATCACTATAATGCAAGGCATACTGCATCCTGTTCTGTGTGCTCTAGAGTCTACCCAACGTCTCGGTTGCTCAGCATACATGTATCTGAAGTGCATGATTCTTTCTTTCAGGCAAAAGTTGCACGTGGTTACGATATGTATGAATGCTTGGTGGAAAAGTGTGGTTTGAAATTCAAAAGCTACAATCGTAGGCATCAGCATTTGGTTGACAAGCATAAATTTCCCACCTCATTTGAGTTTTTCAAGAAGGCTAAACCTTCAAAGAAACAGAGATTGAAGTCCCAACAAAAAAAAACTCTTCCTAAGGAGAAGGATGCAGGAATGATGGAAGTGGAAAACGCAGCCATGGATGACCTTGTTTCAGCAGTCTCTAAACTGAGCACTTCTGACTCCACCCCTTCAAATATCAGCTTTGGTCGCCGTAGCAAAGGCTTGTCATTCGTCCCTCGAACTGTTCAGCGCAGAGATCAATCAAACTCAGCAGCATCTGGGACAAAGAGATAA 765 0.4523 MAMEVEHNQNQQLGFPFWKPLRRKFGPDSPFFAPGNLERELLAKQVALELTEEKEQLEKWMQEEEGREIFCPIVGCGARLTSMDDFENHYNARHTASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKVARGYDMYECLVEKCGLKFKSYNRRHQHLVDKHKFPTSFEFFKKAKPSKKQRLKSQQKKTLPKEKDAGMMEVENAAMDDLVSAVSKLSTSDSTPSNISFGRRSKGLSFVPRTVQRRDQSNSAASGTKR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01084 254 MobiDBLite consensus disorder prediction 238 254 - -
Viun1g01084 254 Coils Coil 43 67 - -
Viun1g01084 254 PANTHER UNCHARACTERIZED 11 242 IPR039258 -
Viun1g01084 254 SMART c2h2final6 134 159 IPR013087 -
Viun1g01084 254 SMART c2h2final6 96 119 IPR013087 -
Viun1g01084 254 SMART c2h2final6 69 94 IPR013087 -
Viun1g01084 254 ProSitePatterns Zinc finger C2H2 type domain signature. 136 159 IPR013087 -
Viun1g01084 254 MobiDBLite consensus disorder prediction 211 254 - -
Viun1g01084 254 MobiDBLite consensus disorder prediction 211 228 - -
Viun1g01084 254 ProSitePatterns Zinc finger C2H2 type domain signature. 71 94 IPR013087 -
Viun1g01084 254 ProSitePatterns Zinc finger C2H2 type domain signature. 98 119 IPR013087 -
Viun1g01084 254 MobiDBLite consensus disorder prediction 172 195 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01084 1 252 C2H2 Transcription Factor Family AT5G14140 63.636 8.92e-115 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun1g01084 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01084 - - gmx:100819557 435.261