Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01076 ATGTTAGAAAGATTTATACATTGTAGGAATAACATTGGGATGGGGGAGCATCAAATGATAAGTGCTGTTGCTTCTTTCTCTAACTCTTCCTCCATGGTGTCTTCTAAAAACTATGATGTTTTTCTAAGCTTTCGGGGTGAGGACACTCGCATGAACTTCACAAGCCATCTTCATGAGGCTTTGAAGGAAAAAAAAGTTGAAACCTATATTGACTACCAGCTTGAGAAGGGAGATGAAATTTCACCAGCAGTCTTCAAAGCAATCGAAGATTCTCGTGTGTCTATTGTGATACTCTCAGAGAACTATGCTTCCTCAAAGTGGTGCTTAGAAGAACTCAGCAAGATTCTAGAATGCCACAGAAACCAAGAACAAATTGTGATTCCAGTGTTTTACAACGTAGACCCATCCCATGTTAGGAAGCAAACAGGGTGCTATGAGCAAAGCTTTGCAACACACGAGGAAGAACTCAGGTGCAACAAATGGAGATCTGCTCTCACTGCAGTAGCCAATTTAGCTGGGTGGGATTCTCGAAACAGGATTGAATCTCAATTCATTAAGGACGTTGTTAAAGATGTTATAGGAAAACTGACTCCTAGATACCCAAACGAACTTAAAGGACTAGTTGGAATTGAGAAAAGTTTTAAACAGATTGAATCATTATTAAAAATTGGTTCAAGTGAAGTTAGAACCGTTGGAATATGGGGCATGGGCGGCATAGGAAAGACCACTCTGGCTATTGCTTTATATGACAAATTGTCTCACGAGTTTGAAGGTCGTTGTGTCCTCACTAATATAAGGGAAAAATCAGACAAGCTCGAAGGTTTACGTGATGAACTTTTGTCGAAGTTGTTAGGGAATAAAATTCATGGGATTGATTATTTTGACATGAGGAGGCTTCAACGTAAAAAGGTTTTCATTGTTCTTGATGATGTGGATACCTCAGAGCAGATAGAAAAGCTAATTCTAGAATACGAGTTTCTCGGACCAGGAAGTAAAGTCATTGTTACAACTAGAAATAAGCAAATACTTAGTCTAGTTGATGAAATATATCAGGTTGAAGAATTAAGCTCATATCACTCTCTTCAACTTTTCTGTTTGACTATATCTGGAGAAAAGCAACCTAAAGATGGATATGAAGATTTATCAAAAAGGGCAATTTTGTACTGCAAAGGTCTTCCTATGGCTTTAAAAGTTTTGGGTTCAAATCTACGCAAAAAAAGTAAAGTGGTATGGGAATGTGAATTGAGAAAACTCCAAAAGATTCCAAATGTTCAAATTCATAATGTGCTAAAATTAAGTTATGAGTGCTTAGATCGATCTCAAAAGGACATCTTTTTAGACATTGTGTGCTTCTTCAATGGATGGGAAAGAGATAGGGTAACATATATTCTGGAGGCTTGCGATTTCTTTGCAGCATCTGGGATAGAAACCCTTTTAGATAAAACTCTCGTAACAATTTCAAATTATAGTCACATAAAAGTGAATGACTTGATACAAAAAATGGGCTGGGAAATTGTTCATCAAGAGTCTATCAAAGATCTTGGAAGGCGAAGTCGATTATGGAAACAGGAGGAAGTGTATGATGTTTTGAAATATAACAAGGGGACTGATTTTGTTGAAGGCATGGTTTTAGATTTGGAGCAATTAGCTGGAGATTTATATTTGAGTTGTGATTCCCTTGCAAAGATGACTAACATGAGAATTCTTAGAATCCACAGACGAAAATGGGGTTGCAGATTTAGTGTGCACCTTCCTGATGGTATTGAGTTGCCTTACAAATTGAGGTACCTTGAGTGGGAAGGATTCTGTCTCAGGTCTTTGCCATCAAACTTTTGTGCTGAACAACTTGTAGAGCTTCACATGTGGAATAGCAAGCTTAAAATGCTTTGGGATGGGGTTCAGAACCTTGTGAATTTAAAGACAATTGACCTTGATGACTCTCGAGACTTGATTGAGATCCCAGACTTGTCTATGGCGGAAAAACTTGAAAGAGTGTCCCTTTATGATTGTGAAAGCTTATGTAAGCTTCATCCATCCATCTCATCTCTTCCCAAACTCAAATATTTGATTTTAAGTGGTTGCAAAGTCATTCAAAGCGTAAATGTTCACTCAAAATCTCTAAATGTACTAAGACTCAGAGGCTGTTCATCTCTCAGTGAATTCTCTGTGACATCAGAGGAGATGACACATTTGGACTTGTCTCAAACCGCTATACGTGAATTGTTGTCACCAATGATATCTCTCCCCAAGCTTACATATTTGTACTTAAGTGGCTGTAGACATATTGAAAACGTTAATCTTCATTTAAGATCTCTCCGTGTGCTAACACTCGTTGGTTGTTCATGTCTCAAAGAATTCTCAGTGGCATCAGATAAATTGACACTATTGGAGTTACCTGACACTGCTATAGGTGTATTGCCATCATCAATTGGTCACTTGTTATCTTTAGAAGAGTTAGACCTACGTGGAACTAATATTGAGTGCTTGCCTGCAAGTATCAAAAGCCTTTCAATGTTAAGAGTGCTTTGGTTAAATGATTGCAAGAAACTGGTATCTGTACAAGAGCTTCCACCATCCTTAAGAGAACTTCATATAAATGATTGTTGGAAACTTGTGTCTCTGCCAGAGCTTCCACCATCAGTGAAAGAGGTGAGTGCCTTTAATTGCCGTTCTCTAGAGGAAAACATCACACAAGAGCTAGTGTTACGACACATGTTACAAAGTTGCATACCCGACAAACATCAACAATATCCTTACAATCCTGTGTATTTTGATGGTGGTTATTTCATCTTTCCGGGAGACCACATCACCGACAATTGTGCGTTTCATGCAACAGAGAGTTCAATAACTATTCCTTCCCTTCCCAGATCTCACTTGTGGGGTTACATTTTTTGCATCATTATTGCCAAGGGACCGATGTCAGATCATCAGTTTTCATGTTCTATCTATCAAGAAGATATATTGGTAGGTTGTGGTCATCGTAGGTTTATAGGCTGCGAAAATTTAATTTCAGATCATGTGTTATTTTTTTATCATGATGTGATCAATTTCGGTGGAACAGATGAAGTGTACGGTCCTTTTAATAGCTTTACATTCATGTTTGAATTTAATGGTGATAAACACACCATAAAAGGGTGTGGGGTCTTTCCCGTATATTTGACATCATCTGGGTTTAAGTTTTGTAATGTTGACTCACAACCAAGAGCAAATGGACCCAAAATTGGAGGCTGTGATAAAGAAAATTTGGAACAACTTTTTGCAGCCAAGAGAAGAAAGACTGCGTGA 3285 0.3805 MLERFIHCRNNIGMGEHQMISAVASFSNSSSMVSSKNYDVFLSFRGEDTRMNFTSHLHEALKEKKVETYIDYQLEKGDEISPAVFKAIEDSRVSIVILSENYASSKWCLEELSKILECHRNQEQIVIPVFYNVDPSHVRKQTGCYEQSFATHEEELRCNKWRSALTAVANLAGWDSRNRIESQFIKDVVKDVIGKLTPRYPNELKGLVGIEKSFKQIESLLKIGSSEVRTVGIWGMGGIGKTTLAIALYDKLSHEFEGRCVLTNIREKSDKLEGLRDELLSKLLGNKIHGIDYFDMRRLQRKKVFIVLDDVDTSEQIEKLILEYEFLGPGSKVIVTTRNKQILSLVDEIYQVEELSSYHSLQLFCLTISGEKQPKDGYEDLSKRAILYCKGLPMALKVLGSNLRKKSKVVWECELRKLQKIPNVQIHNVLKLSYECLDRSQKDIFLDIVCFFNGWERDRVTYILEACDFFAASGIETLLDKTLVTISNYSHIKVNDLIQKMGWEIVHQESIKDLGRRSRLWKQEEVYDVLKYNKGTDFVEGMVLDLEQLAGDLYLSCDSLAKMTNMRILRIHRRKWGCRFSVHLPDGIELPYKLRYLEWEGFCLRSLPSNFCAEQLVELHMWNSKLKMLWDGVQNLVNLKTIDLDDSRDLIEIPDLSMAEKLERVSLYDCESLCKLHPSISSLPKLKYLILSGCKVIQSVNVHSKSLNVLRLRGCSSLSEFSVTSEEMTHLDLSQTAIRELLSPMISLPKLTYLYLSGCRHIENVNLHLRSLRVLTLVGCSCLKEFSVASDKLTLLELPDTAIGVLPSSIGHLLSLEELDLRGTNIECLPASIKSLSMLRVLWLNDCKKLVSVQELPPSLRELHINDCWKLVSLPELPPSVKEVSAFNCRSLEENITQELVLRHMLQSCIPDKHQQYPYNPVYFDGGYFIFPGDHITDNCAFHATESSITIPSLPRSHLWGYIFCIIIAKGPMSDHQFSCSIYQEDILVGCGHRRFIGCENLISDHVLFFYHDVINFGGTDEVYGPFNSFTFMFEFNGDKHTIKGCGVFPVYLTSSGFKFCNVDSQPRANGPKIGGCDKENLEQLFAAKRRKTA 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01076 1094 Coils Coil 262 282 - -
Viun1g01076 1094 FunFam Disease resistance protein (TIR-NBS-LRR class) 34 198 - -
Viun1g01076 1094 Gene3D Ribonuclease Inhibitor 727 909 IPR032675 -
Viun1g01076 1094 Gene3D Ribonuclease Inhibitor 541 726 IPR032675 -
Viun1g01076 1094 Pfam TIR domain 37 206 IPR000157 GO:0007165
Viun1g01076 1094 Pfam NB-ARC domain 217 424 IPR002182 GO:0043531
Viun1g01076 1094 Gene3D - 354 438 IPR042197 -
Viun1g01076 1094 SMART till_3 37 171 IPR000157 GO:0007165
Viun1g01076 1094 SUPERFAMILY Toll/Interleukin receptor TIR domain 28 174 IPR035897 -
Viun1g01076 1094 SUPERFAMILY L domain-like 553 893 - -
Viun1g01076 1094 Gene3D - 197 353 IPR027417 -
Viun1g01076 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 448 IPR027417 -
Viun1g01076 1094 Gene3D - 34 196 IPR035897 -
Viun1g01076 1094 PRINTS Disease resistance protein signature 634 650 - -
Viun1g01076 1094 PRINTS Disease resistance protein signature 389 403 - -
Viun1g01076 1094 PRINTS Disease resistance protein signature 230 245 - -
Viun1g01076 1094 PRINTS Disease resistance protein signature 298 312 - -
Viun1g01076 1094 ProSiteProfiles TIR domain profile. 36 196 IPR000157 GO:0007165
Viun1g01076 1094 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 38 721 IPR044974 GO:0006952
Viun1g01076 1094 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Viun1g01076 1094 Pfam Leucine Rich Repeat 615 634 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01076 Viun-Chr1 18609944 18615777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01076 34 819 WRKY Transcription Factor Family AT4G12020 33.538 2.21e-108 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01076 - - vun:114169696 2197.16