Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01063 ATGGCATATAAGAGTCAACTCATATCATGTTTAAGAGTGCTCTCCATATATTCTGATGGTAATATGGGAGCATTCATGATTCTCCTTTCCTTGGAGCCCCTCCTCTCCTTCTTCTTCCTCCTCATCCTTTTCTACACCGCACTGGTAGAATTCCGGCGACGGAATAAATTCTCCGGCACGGGTCCGGCTACGTATCCCCTCATCGGATGTCTGATATCCTTCTACAAGAACAAGCACCGTTTGCTAGATTGGTACACTGAGTTACTTGGTGAGTCCCCGAGCAACACCATAGTGGTTCAAAGGCTTGGTGCACGTAGAACCATTGTCACTGCAAACCCACAAAATGTTGAGTACATACTCAAGACAAACTTCAACAACTTCCCCAAAGGCAAGCCCTTCACGGAGATCCTTGGAGATTTCCTTGGGCAAGGGATTTTCAACGTGGACGGAGAGCTGTGGCTTACACAGCGCAGATTTGTGAGCCATGAGTTCTCTACCAAGTCCCTGAGGGAGTTTGTCATGCACACGTTGGAGAGGGAAGTGTGTGAGAGGCTTTTGCCGGTGCTTGAGGCGCTGTCCGATGAGAACAAGGTGGTTGACTTGCAGGAGTTGCTAGGGAGGTTCTCGTTCAATGTGATCTGCAAGTTCACACTGGGGACTAATAGGTGCTGCTTGGACCCTTCTGTCCCTACCTGTTCCCTCGCAAGGGCTTTTGATGTGGCTGCAGAGGTGTCTGCGAGGCGTGGGGCAGCACCTTTGTTCATGATCTGGAGGGTGAAGAGATGGCTTGGTGCTGGATCTGAAGGATTGCTTAGAAAAGCTGTTGGGGAGGTTGAGAGGCATGTGATGAGAGTGATTCGGGAGAGGAAGGAGAAGAGAGAGGAGAGTGAGGAAAATGGTGTTGTTGAAGATCTCTTGTCAAGGCTTTTATGTGCAGGTCATGAGGAGGAGTTGATCAAAGACATGGTGATAAGTTTCATTATGGCAGGGAGGGACACTACTTCAGCAGCTATGACGTGGTTCTTCTGGATACTGTCACATTATTCCCACATGGAGAAGCAGATAGTGGAAGAGGCAAAAGGGGTGTTGGATTACGAATCGGTGAAGAATTTGAGTTTCTTGAAGGCATGTTTGTGCGAGTCCATGAGGTTGTATCCCCCAGTGGCATGGGACTCCAAGCATGCCAGTGGTGATGATGTGTTGCCGGATGGCACTTTGGTGAAGGCAGGAGATAGGGTCACATATTTTCCCTATGGAATGGGGAGAATGGAAGCCTTGTGGGGGAAGGACTGCTTTGAATTTAGACCAGATCGATGGTTTCTGGAACCTGGAAACAGTGAGGGAATAATGTTGAACGAAGTTTCTCCTTTCTTGTTTCCAGTTTTTCAGGCTGGTCCAAGGGTGTGTCTTGGCAAAGAAATGGCCTTCATTCAAATGAAGTATGTGGTGGCTTCAATTCTTAGCCGATTCAAGTTTACAATTGTTGCTCCACAGAGGCCTATTTTCGTGCCACTGCTCACGGCACACATGGCTGGTGGTCTAAGAGTATTGGTTTCCAAAAGGGAAAAAACTGAGTGA 1578 0.4816 MAYKSQLISCLRVLSIYSDGNMGAFMILLSLEPLLSFFFLLILFYTALVEFRRRNKFSGTGPATYPLIGCLISFYKNKHRLLDWYTELLGESPSNTIVVQRLGARRTIVTANPQNVEYILKTNFNNFPKGKPFTEILGDFLGQGIFNVDGELWLTQRRFVSHEFSTKSLREFVMHTLEREVCERLLPVLEALSDENKVVDLQELLGRFSFNVICKFTLGTNRCCLDPSVPTCSLARAFDVAAEVSARRGAAPLFMIWRVKRWLGAGSEGLLRKAVGEVERHVMRVIRERKEKREESEENGVVEDLLSRLLCAGHEEELIKDMVISFIMAGRDTTSAAMTWFFWILSHYSHMEKQIVEEAKGVLDYESVKNLSFLKACLCESMRLYPPVAWDSKHASGDDVLPDGTLVKAGDRVTYFPYGMGRMEALWGKDCFEFRPDRWFLEPGNSEGIMLNEVSPFLFPVFQAGPRVCLGKEMAFIQMKYVVASILSRFKFTIVAPQRPIFVPLLTAHMAGGLRVLVSKREKTE 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01063 525 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01063 525 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01063 525 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01063 525 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01063 525 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01063 525 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01063 525 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01063 525 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01063 525 Pfam Cytochrome P450 61 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01063 525 CDD CYP86A 96 514 - -
Viun1g01063 525 PANTHER CYTOCHROME P450 46 515 - -
Viun1g01063 525 Gene3D Cytochrome P450 50 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01063 525 SUPERFAMILY Cytochrome P450 60 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01063 Viun-Chr1 18487951 18489671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01063 59 524 Cytochrome P450 AT3G01900 59.831 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01063 K20665 - gmx:100786130 837.41