Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01022 ATGGGATCTGGCAGTGAGGTTCACTCAGTTGTGGAGTTCAGTCTGGATGCAAAGTGGCTTATAGATCCCAAGCAACTATTTGTTGGGCCAAAAATTGGGGAAGGTGCCCATGCCAAAGTGTACGAAGGAAAATATAAAAATCAGAATGTTGCTGTTAAGATTATTAATAAGGGTGAAACCCCAGAACAGATTTCTAGGAGAGAGGCTCGGTTTGGCAGAGAAATTGCAATGTTATCTAGAGTTCAACACAAAAATCTAGTTAAGTTTATTGGGGCCTGCAAAGAACCAGTTATGGTTATTGTAACTGAACTTCTGTTAGGGGGAACATTGCGCAAATACCTTTGGGGTATCCGGCCAAACTGCTTGGATATGCGTGTGGCAGTTGCATTTGCTCTGGATATTGCGCGAGCAATGGAATGCTTACACTCTCATGGGATCATTCATCGTGACCTTAAACCTGATAACTTGATCTTGACAGAAGATCATAAAACCGTTAAACTTGCCGATTTTGGTCTAGCCAGAGAAGAGTCCTTAACAGAGATGATGACTGCTGAGACAGGGACATATCGTTGGATGGCTCCAGAACTTTACAGCACTGTCACTCTAAGACAAGGGGAGAAGAAGCATTACAACCATAAGGTGGATGCCTACAGTTTTGCTATAGTTCTGTGGGAGCTCATCCATAATAGGTTGCCTTTTGAAGGCATGTCAAATCTACAGGCTGCATATGCAGCTGCATTTAAGAATACAAGGCCGAGTGCTGAAGACCTCCCTGATGAATTGGCTCTGATTGTGACCTCTTGTTGGAGAGAGGATCCAAATGATCGACCCAATTTCTGTCAAATAATACAGATGTTGCTTCGATATCTAATTACCATTTCCCCGGCCGATCCAGTTGTTCCGATGCGTATTGCATCATCCAAAAATGCTGTATTGCCACCAGAATCTCCAGGTACAAGTGCTTTAATGGCTCGAAGAGATGATTCTAGCGAAACCCCAAAAGTTGATATTGAAGGCAGGTCTAAAGGGTGTTTCTTCTGCTTTAATCAGTGTTACTGA 1059 0.4306 MGSGSEVHSVVEFSLDAKWLIDPKQLFVGPKIGEGAHAKVYEGKYKNQNVAVKIINKGETPEQISRREARFGREIAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLWGIRPNCLDMRVAVAFALDIARAMECLHSHGIIHRDLKPDNLILTEDHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNRLPFEGMSNLQAAYAAAFKNTRPSAEDLPDELALIVTSCWREDPNDRPNFCQIIQMLLRYLITISPADPVVPMRIASSKNAVLPPESPGTSALMARRDDSSETPKVDIEGRSKGCFFCFNQCY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01022 352 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Viun1g01022 352 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g01022 352 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g01022 352 SUPERFAMILY Protein kinase-like (PK-like) 17 308 IPR011009 -
Viun1g01022 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Viun1g01022 352 MobiDBLite consensus disorder prediction 311 334 - -
Viun1g01022 352 Gene3D Transferase(Phosphotransferase) domain 1 107 296 - -
Viun1g01022 352 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Viun1g01022 352 CDD STKc_MAP3K-like 32 286 - -
Viun1g01022 352 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Viun1g01022 352 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Viun1g01022 352 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Viun1g01022 352 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Viun1g01022 352 FunFam Kinase suppressor of Ras 1 15 105 - -
Viun1g01022 352 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 19 286 - -
Viun1g01022 352 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01022 Viun-Chr1 17423148 17446470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01022 9 352 MAP Kinase Kinase Kinase AT5G50180 76.744 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Viun1g01022 PK_Tyr_Ser-Thr 1.3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01022 - - gmx:100809826 649.432