Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01018 ATGTGCAACAAGAACAGTCCTTCTTCTCCAGACATTCAAACAACCTCTATTATGAAGAGGACACGGAAACCCACGAAGCGTTATCACTCATCTTCCTCCTCCTCTTCGTCTTCTTCGTCGCTTAAGCCGCACCGCCGCGGGAACCGGACCAAGACGCGGAGGCCCAAGTTCCTTAGCCTGCGTCTTCAGCTATCGGAGCCCAAGAACATGGACTCCCAGCCCAAGCCCAAGGCCCTGCAGCAGCCGCAGCTCAACCTCTTCCCTCTGCATCCGGAGCACCATGACATGCAGGAGGAGCAGAACGTGGCTCTGCTCTTCAGCGCGGAGGGCGGGGCAACGCTGACGGGGCTACTAGAGGAGGATTCGATGTCGCCGTCCTCGGCAACTACAGAGGGATCGCTGTCGGCGCTGACGTGTCCGGCGGAGGACGCGGGGAATTGGCTGGTGAGGAAGGCGATGCGGCGGAGGGAGAGCGAGGAGGGGAGCGAGGAACGGTGGGTGTGCTATTCGGAGGTGGTGGAGGAGAAGAAGGAGACGATGGAGGAAGTGACGAGTTATTGCATGATGGGGACAACGACAACGACAACGTCGTTTGGATTGTTGTCCTTGAAGCTGGATCACCAGGGGATATTGAATGCTTGGTCTGATAAAGGTTCCCTATACGTCGCGGGGGAGGGAGGCCCACACACTGTCCCTGACTTCCTCAATGGTTTCCTCCTTCATAATGCGTTCCTTCCCCATGTTGCATGGGATGGTTGGGGGAATGGTGTGGTTGGGAACACATGGAATGTAACTGAAGATTGTGGGGCTATGAAGACGAATGTGAAGGAAGAAAATGGTTGGAAGTTGGGGCAGAGAGAGGCAAGTGTTCAAAGATATAAGGAGAAGAGACAAAGCAGACTCTTCGCTAAGAAAATCCGTTATGAGGTTCGCAAACTCAATGCTGAAAAACGACCCAGGATGAAGGGACGATTTGTGAAGAGGGAATGA 990 0.5455 MCNKNSPSSPDIQTTSIMKRTRKPTKRYHSSSSSSSSSSSLKPHRRGNRTKTRRPKFLSLRLQLSEPKNMDSQPKPKALQQPQLNLFPLHPEHHDMQEEQNVALLFSAEGGATLTGLLEEDSMSPSSATTEGSLSALTCPAEDAGNWLVRKAMRRRESEEGSEERWVCYSEVVEEKKETMEEVTSYCMMGTTTTTTSFGLLSLKLDHQGILNAWSDKGSLYVAGEGGPHTVPDFLNGFLLHNAFLPHVAWDGWGNGVVGNTWNVTEDCGAMKTNVKEENGWKLGQREASVQRYKEKRQSRLFAKKIRYEVRKLNAEKRPRMKGRFVKRE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01018 329 MobiDBLite consensus disorder prediction 28 43 - -
Viun1g01018 329 Pfam CCT motif 286 328 IPR010402 GO:0005515
Viun1g01018 329 MobiDBLite consensus disorder prediction 1 58 - -
Viun1g01018 329 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 16 329 - -
Viun1g01018 329 ProSiteProfiles CCT domain profile. 286 328 IPR010402 GO:0005515
Viun1g01018 329 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01018 Viun-Chr1 17340412 17343085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01018 201 328 C2C2-CO-like Transcription Factor Family AT1G73870 44.531 4.37e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun1g01018 CCT 1.3e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01018 - - gmx:100798231 467.233