Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00946 ATGGAGGATACTAATCAATGGCGTCGCTATGACCATGACCCACTTCTTCTTACCGACGTTTCTTTGCAACAAGAATCCTCTTCTTATATTCAGAGCTCCAATTCTCTTTCGCAAACATCACTGAACTCTCGGAGTTTGGCTATGGAGGATGTGCCCGTGTGTGGTGACAGTGCCAGTATCGGGTTTTCTCGGGAAGATGGAGGTTTGGAAGGGAACCGCATGAAATTCGATGACCCAATTGTGAAAGATGTGTTTGATGCATCCCCAGATTTGGTTATATGTGGTGGCTCTCCAGATATTGCTGGAATTAGCTGTTGTGATTCCCCTGAGTTTTTGAAGAACCAATATTACAAGAATGTGGAGTCATCTATGGAGCTTTCTCTAGAGTATGGAATCAAGGGGTCTCAAGTTGAAGTTGACAATGGCCCTAAGATGCCAACTGTTAAATTCTCAAATTTCTGTCAAACTTTTGAGCAAGAGGAAGAGCTTCTGAGCCCTGAAGCCTCCTTTGAACTTCTTCCACCCCTTCTAACCAAGGATGCGGCACCCCATGATTCCCCTCCAAGAGATGCTGAGATGCTAGAAGATAATGGAGTGTCTGAGGAGGCAGAATTGGAGTTCTCAGAAGATGCCGATGATACTAGTGTGAAAGAGAAATTTAAAAGGCTGAAAAGAGACTTTGAGTGTCAGAGAAAGGAGCTGGCAGAAACAAGGAGGGAGTTGGGAAAGATCAAGAAGGAGAATCAACAGAAGAGTAGAGAGTGTCAAGAAGCTTGGAACTCCTTGAAAGAGCTTCAGAATGAGCTAATGCGCAAGTCCATGCACGTAGGATCTTTGGCATTTGCCATTGAGGGGCAAGTGAAAGAGAAAAGTAGGTGGTTTTCGTCACTGAGAGATTTAACAAGAAAATTGAAGATTATGAAAATGGAACACATGAAGCTATTAGAAGAAGCTGAGGAAAGCAAAAAATATCAAGCAGATATGAAAGAAATGGGGCATATTATCAAGTCCAAAATAAATGAACAACTGGAGTCCCTTGAAGATCTCAAGTCCAAATATGCTGAAGGGGTTAAGGAGCGGAAAGAGCTTTACAACAAGGTTTTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGTTGTAGGCCTCTCAATGCTGAAGAAATAGCCGCAAGAGCAACCATGGCCTTAGATTTTGAAACTGCGAAAGATGGTGAGCTAACTGTAATGTCAAATGGAACTCCTAAAAAGACTTTTAAGTTCGATGCTGTCTTTGATCCCCAAGCTGAACAAGCTGATATTTTTGAAGACACAGCACCGTTTGCGACATCAGTTCTAGATGGATTCAACGTATGCATTTTTGCATATGGACAGACTGGAACAGGAAAAACTTTCACAATGGAGGGCAGTGAAGAAGCTCGAGGTGTAAACTTTAGGACTCTCGAAAAAATGTTCGACATAATCAAGGAGAGACAGAAGTTTTATTGTTATGATATTTCTGTAAGTGTCTTGGAAGTGTACAACGAGCAAATAAGAGATTTGCTGGTTGCAGGAAATCATCAAGGAGCAGCTGCAAAAAGACTTGAAATAAGGCAAGCTAGTGAAGGAATACATCACATTCCAGGGTTGGTTGAGGCACATGTGAACAATATGACTGAAGTCTGGGAAGTCCTACAAACTGGAAGTAATGCAAGAGCAATAAGCTCAACCAATTCCAATGAGCATAGCAGTCGATCACACTGCATTCACTGTGTTATGGTTAAGGGAGAGAATTTGTTGAATGGGGAATGCACGAGAAGCAAGCTATGGTTGGTGGATCTAGCGGGCAGTGAGCGAGTGGCAAAAACAGAAGTTCATGGTGATAGATTGAAGGAGACACAGAATATTAACAGGTCTCTGTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACGAAAAGTTCACACATCCCATTCAGGAATTCCAAGCTTACACACTTGTTGCAAGACTCATTAGGAGGAGATTCAAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAATGATTTGAGTGAGACAATTTGCTCTCTTAATTTTGCTAGTAGAGTAAGAGGAATAGAATTGGGCCCCGCAAGAAAGCATTTGGACACTGTTGAGCTTTTGCGACACAAACAAATTGCTGATAAAGTTAAACAAGAGATAAAGCAGAAGGATTTGCAAATCAAGAAGATGGAGGAAACAATCCATGGATTAGAGTCCAAGATGAAGGAAAGAGATAGCAGAAACAAAAATCTGCAAGAGAAGGTCAAGGAATTGGAATCACAGCTTCTGATTGAAAGAAAGTTGGCACGTCAACATGTAGACTCAAAGATAGCTGAGCAGCACCAGATGAAACATCAAGAAGAGCAAAATAATGCAGTTATGAGATCAGCACTTGCAAATCGACCTCTAGGAGGTCTCAAGAATTTCAATGATTCAGTGAGTGGTGGATGGTACAAAGACCAACAAATGAATTCTGCTAAACCACTCACAGAGAACAACAACCTCTTTAAACCTTTTATGCCCTTTGCTACAATGGAGAGCTCCATCAAGTGCATTGAGCATGCTGAGAAAGAAAACAATCCTGACATGGCTGACAAAGCCCTACTGCCAAAGAGGCCTGGAAGGGCTTCTTCCATCTGCATGATGGCACCACGTGTTCCTTCAGCCATTGCTTCAAGGAGAAACTCTCTGATTCCACTCCCAAGTATTCCTAGCTTAACACAGTTCCAATCACCACTGTTACTAAATTTAACAAACCAAGTTGACCAGAAAGATTTCATTGGGGAAGTAGAAACAAACTGTGTTCCTGCACAGACTCATTGTGAGAGTCCCAAAGAAGTTAGAAGTGGTGCTAAGAGGATAGGTAGCATACTAAGAAGAAGCCTTCATAAGAAAATCCAAGTGAAGTCTCCACTTCATCAGCACATGAGGAAGGTTGGTGTAAATGTTGGGATGGAGAAAGTTAGAGTTTCCATTGGAAGTAGGGGTAGATTGGCACCAAGGGGGCAAGTAGGTAGTTGTAGAAAAGCAGGAACTAGAGATATTCAACAAAAGAACACTCAAAAGGAAAAGGAAAGGGGATGGATATGA 3111 0.4201 MEDTNQWRRYDHDPLLLTDVSLQQESSSYIQSSNSLSQTSLNSRSLAMEDVPVCGDSASIGFSREDGGLEGNRMKFDDPIVKDVFDASPDLVICGGSPDIAGISCCDSPEFLKNQYYKNVESSMELSLEYGIKGSQVEVDNGPKMPTVKFSNFCQTFEQEEELLSPEASFELLPPLLTKDAAPHDSPPRDAEMLEDNGVSEEAELEFSEDADDTSVKEKFKRLKRDFECQRKELAETRRELGKIKKENQQKSRECQEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSLRDLTRKLKIMKMEHMKLLEEAEESKKYQADMKEMGHIIKSKINEQLESLEDLKSKYAEGVKERKELYNKVLELRGNIRVFCRCRPLNAEEIAARATMALDFETAKDGELTVMSNGTPKKTFKFDAVFDPQAEQADIFEDTAPFATSVLDGFNVCIFAYGQTGTGKTFTMEGSEEARGVNFRTLEKMFDIIKERQKFYCYDISVSVLEVYNEQIRDLLVAGNHQGAAAKRLEIRQASEGIHHIPGLVEAHVNNMTEVWEVLQTGSNARAISSTNSNEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVHGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPARKHLDTVELLRHKQIADKVKQEIKQKDLQIKKMEETIHGLESKMKERDSRNKNLQEKVKELESQLLIERKLARQHVDSKIAEQHQMKHQEEQNNAVMRSALANRPLGGLKNFNDSVSGGWYKDQQMNSAKPLTENNNLFKPFMPFATMESSIKCIEHAEKENNPDMADKALLPKRPGRASSICMMAPRVPSAIASRRNSLIPLPSIPSLTQFQSPLLLNLTNQVDQKDFIGEVETNCVPAQTHCESPKEVRSGAKRIGSILRRSLHKKIQVKSPLHQHMRKVGVNVGMEKVRVSIGSRGRLAPRGQVGSCRKAGTRDIQQKNTQKEKERGWI 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00946 1036 PRINTS Kinesin heavy chain signature 600 618 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00946 1036 PRINTS Kinesin heavy chain signature 569 586 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00946 1036 PRINTS Kinesin heavy chain signature 649 670 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00946 1036 PRINTS Kinesin heavy chain signature 447 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00946 1036 ProSitePatterns Kinesin motor domain signature. 599 610 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun1g00946 1036 MobiDBLite consensus disorder prediction 1022 1036 - -
Viun1g00946 1036 FunFam kinesin-like protein KIN-14R 318 701 - -
Viun1g00946 1036 Coils Coil 217 268 - -
Viun1g00946 1036 Coils Coil 346 366 - -
Viun1g00946 1036 MobiDBLite consensus disorder prediction 178 212 - -
Viun1g00946 1036 CDD KISc_C_terminal 371 701 - -
Viun1g00946 1036 ProSiteProfiles Kinesin motor domain profile. 373 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00946 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 737 IPR027417 -
Viun1g00946 1036 Pfam Kinesin motor domain 379 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00946 1036 Coils Coil 720 775 - -
Viun1g00946 1036 SMART kinesin_4 371 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00946 1036 Coils Coil 297 317 - -
Viun1g00946 1036 Gene3D Kinesin motor domain 314 701 IPR036961 -
Viun1g00946 1036 PANTHER KINESIN-LIKE PROTEIN KLP-3 169 844 IPR027640 GO:0003777|GO:0007018
Viun1g00946 1036 MobiDBLite consensus disorder prediction 1001 1036 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00946 Viun-Chr1 13446647 13451857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00946 231 730 Calmodulin-binding Proteins AT5G65930 37.381 6.42e-86 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00946 K10406 - gmx:100817247 1744.55