Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00945 ATGGAGGATACTAATCAATGGCGTCGCTATGACCATGACCCACTTCTTCTTACCGACGTTTCTTTGCAACAAGAATCCTCTTCTTATATTCAGAGCTCCAATTCTCTTTCGCAAACATCACTGAACTCTCGGAGTTTGGCTATGGAGGATGTGCCCGTGTGTGGTGACAGTGCCAGTATCGGGTTTTCTCGGGAAGATGGAGGTTTGGAAGGGAACCGCATGAAATTCGATGACCCAATTGTGAAAGATGTGTTTGATGGAAGATCTATTTTGGGGTATTCTCTAGCATCCCCAGATTTGGTTATATGTGGTGGCTCTCCAGATATTGCTGGAATTAGCTGTTGTGATTCCCCTGAGTTTTTGAAGAACCAATATTACAAGAATGTGGAGTCATCTATGGAGCTTTCTCTAGAGTATGGAATCAAGGGGTCTCAAGTTGAAGTTGACAATGGCCCTAAGATGCCAACTGTTAAATTCTCAAATTTCTGTCAAACTTTTGAGCAAGAGGAAGAGCTTCTGAGCCCTGAAGCCTCCTTTGAACTTCTTCCACCCCTTCTAACCAAGGATGCGGCACCCCATGATTCCCCTCCAAGAGATGCTGAGATGCTAGAAGATAATGGAGTGTCTGAGGAGGCAGAATTGGAGTTCTCAGAAGATGCCGATGATACTAGTGTGAAAGAGAAATTTAAAAGGCTGAAAAGAGACTTTGAGTGTCAGAGAAAGGAGCTGGCAGAAACAAGGAGGGAGTTGGGAAAGATCAAGAAGGAGAATCAACAGAAGAGTAGAGAGTGTCAAGAAGCTTGGAACTCCTTGAAAGAGCTTCAGAATGAGCTAATGCGCAAGTCCATGCACGTAGGATCTTTGGCATTTGCCATTGAGGGGCAAGTGAAAGAGAAAAGTAGGTGGTTTTCGTCACTGAGAGATTTAACAAGAAAATTGAAGATTATGAAAATGGAACACATGAAGCTATTAGAAGAAGCTGAGGAAAGCAAAAAATATCAAGCAGATATGAAAGAAATGGGGCATATTATCAAGTCCAAAATAAATGAACAACTGGAGTCCCTTGAAGATCTCAAGTCCAAATATGCTGAAGGGGTTAAGGAGCGGAAAGAGCTTTACAACAAGGTTTTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGTTGTAGGCCTCTCAATGCTGAAGAAATAGCCGCAAGAGCAACCATGGCCTTAGATTTTGAAACTGCGAAAGATGGTGAGCTAACTGTAATGTCAAATGGAACTCCTAAAAAGACTTTTAAGTTCGATGCTGTCTTTGATCCCCAAGCTGAACAAGCTGATATTTTTGAAGACACAGCACCGTTTGCGACATCAGTTCTAGATGGATTCAACGTATGCATTTTTGCATATGGACAGACTGGAACAGGAAAAACTTTCACAATGGAGGGCAGTGAAGAAGCTCGAGGTGTAAACTTTAGGACTCTCGAAAAAATGTTCGACATAATCAAGGAGAGACAGAAGTTTTATTGTTATGATATTTCTGTAAGTGTCTTGGAAGTGTACAACGAGCAAATAAGAGATTTGCTGGTTGCAGGAAATCATCAAGGAGCAGCTGCAAAAAGACTTGAAATAAGGCAAGCTAGTGAAGGAATACATCACATTCCAGGGTTGGTTGAGGCACATGTGAACAATATGACTGAAGTCTGGGAAGTCCTACAAACTGGAAGTAATGCAAGAGCAATAAGCTCAACCAATTCCAATGAGCATAGCAGTCGATCACACTGCATTCACTGTGTTATGGTTAAGGGAGAGAATTTGTTGAATGGGGAATGCACGAGAAGCAAGCTATGGTTGGTGGATCTAGCGGGCAGTGAGCGAGTGGCAAAAACAGAAGTTCATGGTGATAGATTGAAGGAGACACAGAATATTAACAGGTCTCTGTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACGAAAAGTTCACACATCCCATTCAGGAATTCCAAGCTTACACACTTGTTGCAAGACTCATTAGGAGGAGATTCAAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAATGATTTGAGTGAGACAATTTGCTCTCTTAATTTTGCTAGTAGAGTAAGAGGAATAGAATTGGGCCCCGCAAGAAAGCATTTGGACACTGTTGAGCTTTTGCGACACAAACAAATTGCTGATAAAGTTAAACAAGAGATAAAGCAGAAGGATTTGCAAATCAAGAAGATGGAGGAAACAATCCATGGATTAGAGTCCAAGATGAAGGAAAGAGATAGCAGAAACAAAAATCTGCAAGAGAAGGTCAAGGAATTGGAATCACAGCTTCTGATTGAAAGAAAGTTGGCACGTCAACATGTAGACTCAAAGATAGCTGAGCAGCACCAGATGAAACATCAAGAAGAGCAAAATAATGCAGTTATGAGATCAGCACTTGCAAATCGACCTCTAGGAGGTCTCAAGAATTTCAATGATTCAGTGAGTGGTGGATGGTACAAAGACCAACAAATGAATTCTGCTAAACCACTCACAGAGAACAACAACCTCTTTAAACCTTTTATGCCCTTTGCTACAATGGAGAGCTCCATCAAGTGCATTGAGCATGCTGAGAAAGAAAACAATCCTGACATGGCTGACAAAGCCCTACTGCCAAAGAGGCCTGGAAGGGCTTCTTCCATCTGCATGATGGCACCACGTGTTCCTTCAGCCATTGCTTCAAGGAGAAACTCTCTGATTCCACTCCCAAGTATTCCTAGCTTAACACAGTTCCAATCACCACTGTTACTAAATTTAACAAACCAAGTTGACCAGAAAGATTTCATTGGGGAAGTAGAAACAAACTGTGTTCCTGCACAGACTCATTGTGAGAGTCCCAAAGAAGTTAGAAGTGGTGCTAAGAGGATAGGTAGCATACTAAGAAGAAGCCTTCATAAGAAAATCCAAGTGAAGTCTCCACTTCATCAGCACATGAGGAAGGTTGGTGTAAATGTTGGGATGGAGAAAGTTAGAGTTTCCATTGGAAGTAGGGGTAGATTGGCACCAAGGGGGCAAGTAGGTAGTTGTAGAAAAGCAGGAACTAGAGATATTCAACAAAAGAACACTCAAAAGGAAAAGGAAAGGGGATGGATATGA 3138 0.4197 MEDTNQWRRYDHDPLLLTDVSLQQESSSYIQSSNSLSQTSLNSRSLAMEDVPVCGDSASIGFSREDGGLEGNRMKFDDPIVKDVFDGRSILGYSLASPDLVICGGSPDIAGISCCDSPEFLKNQYYKNVESSMELSLEYGIKGSQVEVDNGPKMPTVKFSNFCQTFEQEEELLSPEASFELLPPLLTKDAAPHDSPPRDAEMLEDNGVSEEAELEFSEDADDTSVKEKFKRLKRDFECQRKELAETRRELGKIKKENQQKSRECQEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSLRDLTRKLKIMKMEHMKLLEEAEESKKYQADMKEMGHIIKSKINEQLESLEDLKSKYAEGVKERKELYNKVLELRGNIRVFCRCRPLNAEEIAARATMALDFETAKDGELTVMSNGTPKKTFKFDAVFDPQAEQADIFEDTAPFATSVLDGFNVCIFAYGQTGTGKTFTMEGSEEARGVNFRTLEKMFDIIKERQKFYCYDISVSVLEVYNEQIRDLLVAGNHQGAAAKRLEIRQASEGIHHIPGLVEAHVNNMTEVWEVLQTGSNARAISSTNSNEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVHGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPARKHLDTVELLRHKQIADKVKQEIKQKDLQIKKMEETIHGLESKMKERDSRNKNLQEKVKELESQLLIERKLARQHVDSKIAEQHQMKHQEEQNNAVMRSALANRPLGGLKNFNDSVSGGWYKDQQMNSAKPLTENNNLFKPFMPFATMESSIKCIEHAEKENNPDMADKALLPKRPGRASSICMMAPRVPSAIASRRNSLIPLPSIPSLTQFQSPLLLNLTNQVDQKDFIGEVETNCVPAQTHCESPKEVRSGAKRIGSILRRSLHKKIQVKSPLHQHMRKVGVNVGMEKVRVSIGSRGRLAPRGQVGSCRKAGTRDIQQKNTQKEKERGWI 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00945 1045 SMART kinesin_4 380 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00945 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 746 IPR027417 -
Viun1g00945 1045 MobiDBLite consensus disorder prediction 1031 1045 - -
Viun1g00945 1045 Coils Coil 306 326 - -
Viun1g00945 1045 FunFam kinesin-like protein KIN-14R 327 710 - -
Viun1g00945 1045 Pfam Kinesin motor domain 388 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00945 1045 Coils Coil 355 375 - -
Viun1g00945 1045 MobiDBLite consensus disorder prediction 187 221 - -
Viun1g00945 1045 Gene3D Kinesin motor domain 323 710 IPR036961 -
Viun1g00945 1045 Coils Coil 729 784 - -
Viun1g00945 1045 PANTHER KINESIN-LIKE PROTEIN KLP-3 178 853 IPR027640 GO:0003777|GO:0007018
Viun1g00945 1045 Coils Coil 226 277 - -
Viun1g00945 1045 ProSiteProfiles Kinesin motor domain profile. 382 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00945 1045 MobiDBLite consensus disorder prediction 1010 1045 - -
Viun1g00945 1045 CDD KISc_C_terminal 380 710 - -
Viun1g00945 1045 ProSitePatterns Kinesin motor domain signature. 608 619 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun1g00945 1045 PRINTS Kinesin heavy chain signature 578 595 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00945 1045 PRINTS Kinesin heavy chain signature 456 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00945 1045 PRINTS Kinesin heavy chain signature 658 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g00945 1045 PRINTS Kinesin heavy chain signature 609 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00945 Viun-Chr1 13446647 13452052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00945 240 739 Calmodulin-binding Proteins AT5G65930 37.381 7.04e-86 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00945 K10406 - gmx:100817247 1769.21