Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00940 ATGGAGCCATTTCACTCAGCAGATGACATCGCCTTGGAGGAACATTTCGAAATCCATATACCAAATCAGCAGCCTGAACAAGTACACGTCAAAAGTGGTCTGCCTCACAATGACTCCGGAGATGATATTCCACCCAAAGTACACATGTGTTTTGATAGCTTAGATGATGTAAAACAATTTTATAAAAATTACAGTATTAGAAGCGGCTTTGGTATTCGCACCAGTACTTCAGCACGGGGCGAAGATAATGAAATCAACTACATCAAGTTGGTCTGTTCACGCGAGGGGAATTATATGTCCGCTATTCCTCCAGAATTGAAGACCGTCCCCACTAAAGCAAAACAGTGTAAAGCTTCAATCACCGCAGCAAAGAAAGACGGACAATGGTTCATAAGGAGCATTGTAACTGATCACAGTCATGACATTAGTCCGAAGAAGTCAAGGCTAATACGGGGCAACCGTAAAGTTGATATGCATTCAAGGCAAACTGTTGAGACTAACGATGACGCTGGTGTCCGAATTAACAAAAGTTTCCGGTCTCTTGTGTCTGAAGCAGGTGGATATGAACACGTTAACTTCATTGAACGTGATGTTCGCAACTACATTGGTCAACAAAGGCGATCATTGTGTAAGGATGTGGATGGGCAGGCCCTTCTACGACATTTTTCAAAAATGCGGGAATTAAACAACGACTTCTTCTTTGAAATTGACATGGACGAAGACAACCGTATATGCAATGTTTTTTGGGCCGATGCGCGCAGTAGAGCGGCATCTGAGGATTTTGGTGATGTTGTGTCTTTTGACACCACATATTTGACCAACAAATATGACATGCCTTTCGCTCCTTTTGTAGGTGTTAATCACCATGGACACTCCATTTTGTTAGGTTGTGGTCTAGTATCAGCTGAAGACACAAGGTCGTTCGTGTGGATTTTTGAATTGTGGCTTCGGTGCATGTATAACAAACCACCGGAAGGAATTGTTACCGACCAATGTAAGGCAATGCTTAATGCAATTAGAGAAGTTTTCCCAAATACCAAACATCGATGGTGTCTATGGCACATAATGAAAAAAGTGCCGGAAAAATTGCAAGGTTACACAAATTACAAATCTATCAAGACTGAATTGAAAAGACTAGTGTATGATTCAATCACGATGGGTGAGTTTGAGTTGGGATGGCATGCATTTATTGGACAATATGATTTGACCACAAACGACTGGCTCACTACATTGTTTGACGAGAGACATCATTGGGTTCCTTGCTATCTAAAAAGTCAGTTTTGGGCTGGCATGTCAACCACCCAAAGGAGTGAAGGCCTGAATGCTTTTTTTGATGGGTTCATTAATTCGGGAACTACTTTGTAA 1365 0.4168 MEPFHSADDIALEEHFEIHIPNQQPEQVHVKSGLPHNDSGDDIPPKVHMCFDSLDDVKQFYKNYSIRSGFGIRTSTSARGEDNEINYIKLVCSREGNYMSAIPPELKTVPTKAKQCKASITAAKKDGQWFIRSIVTDHSHDISPKKSRLIRGNRKVDMHSRQTVETNDDAGVRINKSFRSLVSEAGGYEHVNFIERDVRNYIGQQRRSLCKDVDGQALLRHFSKMRELNNDFFFEIDMDEDNRICNVFWADARSRAASEDFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGHSILLGCGLVSAEDTRSFVWIFELWLRCMYNKPPEGIVTDQCKAMLNAIREVFPNTKHRWCLWHIMKKVPEKLQGYTNYKSIKTELKRLVYDSITMGEFELGWHAFIGQYDLTTNDWLTTLFDERHHWVPCYLKSQFWAGMSTTQRSEGLNAFFDGFINSGTTL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00940 454 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 454 IPR031052 GO:0006355
Viun1g00940 454 Pfam FAR1 DNA-binding domain 59 143 IPR004330 -
Viun1g00940 454 Pfam MULE transposase domain 264 358 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00940 Viun-Chr1 13258509 13259873 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun1g00940 MULE 3.3e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00940 - - vun:114165601 902.123