Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00921 ATGGCTTCCGAGAACCTAAACCCCGCCACAGTCACGAAAGCCATAGACGCGCTTCTCAAATGGCGCCGCACTCAATCGGAAACTCAAAAGCCCAAACTCTTCGATCAAGACGAAGAATTTGTGTACCTCGTCGTAACGCTGAAGAAGATACCCGCGAAATCGCGCGTTAACCCTTACAAGATCCCTCTCCCTCACTCACTGATCTCGCAGTTCTCCGAACAGTGTCTCATCCTCGACGACCGGCCCAACAAGGGCCGCGTGACCAAGGCCCAGGCCCAGGCCAAGATCCAATCCGAGTCTATCCCCATCGCGAAAATCCTGAAGCTGTCAAAGCTGGCCTCCGATTATCGTGCTTTTGAGGCGAAGCGGAAGCTCTGTGGTTCCTACGATTTGTTTTTTGCAGAGAAGACTATTGTGCCGTTGCTTCCTCGGCTACTCGGGAAGCAATTTTTCAAGAAGAGGAAGTTGCCGGTGCCGGTGGATCTGAAGAAGAGTAACTGGAAGGAGCAGGTGGAGAAGGCGTGCTCGTCCGCGATGCTGTTCATGCGGACCGGCACGTGTAGCGTGGTTAGGGTTGCCAAGGTGGGGATGGAGAGAGACTGGATTGTGGAGAATGTGATGGCTGCGGTTGAGGGGATTGTGGAGGTTGTGCCGAAGAAGTGGGGGAATGTGCGGTCGTTGCATTTGAAGCTGTTGGAGAGTGTGTCGTTGCCGGTGTATCAGGTAGTTCCGGACGTGAAGTTGAGGATTGAGGGTGCTAACGAGCAGGATGAGAAAAAGGAGAAGAACAAGAAGAGGAAAAAAGATGAGGAGGTTCGTGAATCGGCAAAGAAGAAGGGGAGAATTCATGAAGTTAGGTATATGGATGAGAATGGTGGTGAGGATGAGATTGAAAATGAATTGGCGAGTGATGATGGTGGTGGTGATGAGAATGTGGATGAGAAGACGAAGAGAGGGGTTTCGAGTGTGTTGAATGATGGGAAGAGGTTGAAGAAATCGTCTGGTGTCAAGGAGAATAGAAAAAAGGGGAAGAGTGGTAGTGAATTGGTTGCTGAGGATACGGAATCTAGTGCCAAGGAGAAGAAGAAAAAGGTGAAGAGTGAGACGGAATTGGTTGTTAGGGATGAGGAATCTGGTGTGAAGAAGACGAAGAAAGGGGAATTGAAGAAGATGAAAACAGGGGAAGTGAAGGTGAAGGCTGTGAAAAGTGTGAAGACTAAGAAAAGTAAGAAGGCTTAG 1239 0.498 MASENLNPATVTKAIDALLKWRRTQSETQKPKLFDQDEEFVYLVVTLKKIPAKSRVNPYKIPLPHSLISQFSEQCLILDDRPNKGRVTKAQAQAKIQSESIPIAKILKLSKLASDYRAFEAKRKLCGSYDLFFAEKTIVPLLPRLLGKQFFKKRKLPVPVDLKKSNWKEQVEKACSSAMLFMRTGTCSVVRVAKVGMERDWIVENVMAAVEGIVEVVPKKWGNVRSLHLKLLESVSLPVYQVVPDVKLRIEGANEQDEKKEKNKKRKKDEEVRESAKKKGRIHEVRYMDENGGEDEIENELASDDGGGDENVDEKTKRGVSSVLNDGKRLKKSSGVKENRKKGKSGSELVAEDTESSAKEKKKKVKSETELVVRDEESGVKKTKKGELKKMKTGEVKVKAVKSVKTKKSKKA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00921 412 MobiDBLite consensus disorder prediction 254 387 - -
Viun1g00921 412 Pfam Ribosomal protein L1p/L10e family 32 235 IPR028364 -
Viun1g00921 412 CDD Ribosomal_L1 11 239 IPR028364 -
Viun1g00921 412 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 13 234 - -
Viun1g00921 412 FunFam Ribosomal protein L1p/L10e family 85 176 - -
Viun1g00921 412 Coils Coil 250 279 - -
Viun1g00921 412 MobiDBLite consensus disorder prediction 308 387 - -
Viun1g00921 412 SUPERFAMILY Ribosomal protein L1 36 240 IPR023674 -
Viun1g00921 412 Gene3D - 86 177 IPR016095 -
Viun1g00921 412 MobiDBLite consensus disorder prediction 293 307 - -
Viun1g00921 412 MobiDBLite consensus disorder prediction 254 292 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00921 128 230 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 1.99e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00921 K14775 - gmx:100782862 497.664