Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00891 ATGAAGCAGCTCATCCGTCGCCTCTCGCGCGTCGCTGACTCCTCAAATTACACGCTCCTCCGCTCGGACTCTTACTCCTCGTCTCGGGGCTGCCGCCGCCGCCACCGGTCCGAGTCGTTCCGCGCCTCCAAGATCCGCCGCTCCTCTGCGGTGGTTCCGGAGGGGCACGTGCCGATCTACGTCGGCGACGAGATGGAGAGGTTTGTGGTGTGCGCTGAGCTCCTCAACCACCCTGTCTTCGTGAAACTACTCAACGAATCCGCGCAGGAATACGGCTACGAGCAGAAAGGCGTGCTCCGGTTGCCATGCCGCGTCTTCGACTTCGAGCGCGTGCTCCACGCGCTCCGCCTTGGCCTCTACGCGCCTGACGTCTCCGAGCTCCTTAGCTTCTTGCCGGAAGAATTATCCTGA 411 0.6277 MKQLIRRLSRVADSSNYTLLRSDSYSSSRGCRRRHRSESFRASKIRRSSAVVPEGHVPIYVGDEMERFVVCAELLNHPVFVKLLNESAQEYGYEQKGVLRLPCRVFDFERVLHALRLGLYAPDVSELLSFLPEELS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00891 136 Pfam Auxin responsive protein 7 115 IPR003676 GO:0009733
Viun1g00891 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00891 Viun-Chr1 12269986 12271179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00891 1 115 Calmodulin-binding Proteins AT2G24400 31.092 2.93e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00891 K14488 - gmx:100793103 200.29