Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00885 ATGGCGGACGAGGTTGTTCTGTTGGATACATGGGCCAGCATGTTTGGGATGCGGATTAGAATTGCATTGGCAGAAAAGGGTGTTAAGTACGAATACAAGGAAGAGGATCTCAGAAACAAGAGCCCTTTGCTTCTGCAGATGAACCCTGTTCACAAGAAGATTCCAGTTCTGATCCATAATGGAAAACCCATTTGTGAATCTGCAATAATACTGCAGTATATCGATGAGGTATGGAATCACAACCCTCAACTCATGCCCTCTGACCCTTATGAGAGGGCTCAAGCCAGATTCTGGATCGATTACATTGACAAAAAGGTGTATGATACATGGAGGAAAATGTGGCTTTCCAGTGGAGAGGAGCATGAGACATGGAAAAAGGAGTTTATCTCTATCTTTAAGCAACTAGAAGAAACACTTGGAGACAAACCTTTTTTTGGGGGCGACATGTTTGGCTTTGTTGATGTTGATCTGATCCCCTTTTATAGTTGGTTCTATACGTATGAGACATATGGTAACTTCAAAATGGACACAGAATGTCCTAAACTCGTTGCTTGGGCCAAGAGATGCATGGAGAGAGAGGCCGTATCCAAAACACTTCCTGATGAAAAGAAGGTGTATGCTGTTATTGATGGAATAAAGAAAGCACTTTTTTCAAAATAG 660 0.4182 MADEVVLLDTWASMFGMRIRIALAEKGVKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPICESAIILQYIDEVWNHNPQLMPSDPYERAQARFWIDYIDKKVYDTWRKMWLSSGEEHETWKKEFISIFKQLEETLGDKPFFGGDMFGFVDVDLIPFYSWFYTYETYGNFKMDTECPKLVAWAKRCMEREAVSKTLPDEKKVYAVIDGIKKALFSK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00885 219 FunFam Glutathione S-transferase U20 88 219 - -
Viun1g00885 219 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Viun1g00885 219 CDD GST_C_Tau 89 209 IPR045074 GO:0004364|GO:0006749
Viun1g00885 219 Gene3D - 88 217 - -
Viun1g00885 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Viun1g00885 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Viun1g00885 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Viun1g00885 219 CDD GST_N_Tau 5 78 - -
Viun1g00885 219 Gene3D Glutaredoxin 1 87 - -
Viun1g00885 219 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Viun1g00885 219 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Viun1g00885 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 206 IPR045073 -
Viun1g00885 219 Pfam Glutathione S-transferase, C-terminal domain 124 188 - -
Viun1g00885 219 FunFam Tau class glutathione S-transferase 1 87 - -
Viun1g00885 219 SUPERFAMILY GST C-terminal domain-like 76 210 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00885 Viun-Chr1 11924923 11925954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00885 1 214 Glutathione S-transferase Gene Family AT1G78380 64.486 8.30e-107 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00885 K00799 - gmx:106796199 391.734