Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00845 ATGGCCATGGAAACAAGAAGAGTAAGAAAAAGTGTTATGATACTTCTCCTCTACCTGACTTTCTCTGCCATTTCTCTCACTCAATGTGATGCAGATAGATCAATGAGGGTATTAAGAGGCCCCAGAGATAAAAGAAATTCAAGCAACAACAAAATCTCAAAGAAGTTGAAAACAGTTAAGAATTTAGTTGAGAATCCAACCGTTTTCTCATCAAATGTAGAACCCTACAGTCTTAGCTCACCATTCTCTTTGCCTCCTTATGAATCATTGGCTCCAATTCCACTGCCAGAAAACAGCCCTCCATTTTGTGTGTTCCCACCACCAGGCATTCCTTCCACCACCATGCCAACCCCCACAGGCTTTCAACCCACAACACCATCACCACCAGACTTTTACACTTCACCGGTTATCCCAACCCAAAACCCCCCTCCAAACCCCCTGATCATAACACCAGGCCCACCCACTATCACGCCGGGCTCACCTGAGCCCGTGCTCAATCCTCCCATCATTATCCCAAGCCCACCAGATACCTCAATGGGCCCACCTTACTTTGAGCCCAGCCCACCCTACTTTGAGCCCACCCCACCTTTCATAATCCCTTCCCCCACAGGTGGCATTACCCCGGGCCCCCCAATCATAATCCCTTCCCCCACAGAGGGCACTCTCCCAAGCCCACCAAGCACTGTACCATCCCCCACTGAAGGCACTCTCCCCAGCCCAGGTGTGTTTCAGCCACCTGTGGTGTACCCTCCACCAAGTGTGCCACCACCACCCAACTATGCCCCAAGGACCACCTTGTGGTGTGTGGCTAAACCCTCGGTTCCAGACCCAATCATCCAAGAGGCCATGAACTATGCCTGCTGGTCTGGAGCAGATTGCACCTCAATTCAGCCCAATGGGCCCTGCTATGAGCCCAATACTGTGTATGCACATGCTTCGTATGCTTTCAATAGTTATTGGCAAAGGACTAAAGGTGCTGGAGGCAATTGTGAGTTTGGAGGAACAGCCATGCTAGTTGCTGTTGACCCTAGCTTCGATGGGTGTCATTTCATCTACAACTGA 1062 0.5038 MAMETRRVRKSVMILLLYLTFSAISLTQCDADRSMRVLRGPRDKRNSSNNKISKKLKTVKNLVENPTVFSSNVEPYSLSSPFSLPPYESLAPIPLPENSPPFCVFPPPGIPSTTMPTPTGFQPTTPSPPDFYTSPVIPTQNPPPNPLIITPGPPTITPGSPEPVLNPPIIIPSPPDTSMGPPYFEPSPPYFEPTPPFIIPSPTGGITPGPPIIIPSPTEGTLPSPPSTVPSPTEGTLPSPGVFQPPVVYPPPSVPPPPNYAPRTTLWCVAKPSVPDPIIQEAMNYACWSGADCTSIQPNGPCYEPNTVYAHASYAFNSYWQRTKGAGGNCEFGGTAMLVAVDPSFDGCHFIYN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00845 353 FunFam Glucan endo-1,3-beta-glucosidase 4 261 353 - -
Viun1g00845 353 PANTHER BETA-1,3 GLUCANASE 263 350 IPR044788 -
Viun1g00845 353 PRINTS Proline rich extensin signature 131 147 - -
Viun1g00845 353 PRINTS Proline rich extensin signature 107 128 - -
Viun1g00845 353 PRINTS Proline rich extensin signature 78 94 - -
Viun1g00845 353 PRINTS Proline rich extensin signature 150 167 - -
Viun1g00845 353 PRINTS Proline rich extensin signature 177 202 - -
Viun1g00845 353 MobiDBLite consensus disorder prediction 216 236 - -
Viun1g00845 353 SMART X8_cls 266 350 IPR012946 -
Viun1g00845 353 Pfam X8 domain 266 337 IPR012946 -
Viun1g00845 353 Gene3D - 262 349 - -
Viun1g00845 353 MobiDBLite consensus disorder prediction 216 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00845 Viun-Chr1 10841718 10845449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00845 264 350 Glycoside Hydrolase AT3G13560 46.591 6.85e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00845 - - gmx:100794886 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g00845 1 10841718 10845449 Viun1g00845 1 10841718 10845449 ECH