Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00844 ATGATAACTTTTCAAGCATCTTCAAGCACCATCTCAAACTTGCTCTTAGTTTCATGTGGTTTTCTCTTGCCAACCCTGGTATTAGGAGATTGCACATGTGAGAGAGATGAGACTAAAAGGAGTGACTCAAGTGCAGTGCTTCACTACAAACTTGGGTCAATTGCTTCTGTGCTTGTTGCTGGGGCTCTTGGGGTGAGTCTTCCATTGCTGAGCAAAAGAATCCCTGCTCTTAATCCCAAGAATGACATATTCTTCATGGTTAAGGCCTTTGCTGCAGGGGTGATTCTTGCAACTGGGTTTGTCCACATACTTCCTGATGCATATGAAAGCTTGACTTCACCTTGCCTTAAGGAGAATCCATGGGGGAAGTTTCCCTTCACTGGCTTTGTTGCCATGATGTCCTCAATTGGGACCTTAATGGTGGACTCATTTGCCACAGGCTTCTACCACAGGCAACATTTTAACCCCTCCAAGCAGGTTCCTGCTGATGAAGAGATTGCAGATGAACATGCTGGTCACATACATGTTCACACTCATGCCACACATGGCCATGCTCATGGAGCACCTCTCTCCTCTCAGGATTCAGAAACGTCTGAAGTAATTAGGCAGCGCATCATATCACAAGTGTTGGAAATAGGAATTGTGGTCCATTCGGTGATAATTGGATTATCATTGGGAACTGCGGGGAGCATTGATACCATAAAACCTCTTCTGGTGGCCTTATCTTTCCATCAATTTTTTGAGGGGATGGGTCTTGGTGGTTGCATATCTCAGGCAGAGTTTGAGTCAAAGTCTACAGCAATTATGGCAACTTTTTTCTCCCTGACAACTCCAATTGGTATAGCAATTGGAATGGGAGTGTCAAGTGCTTATAAAGAGAATAGCTCAACTGCTTTAACTGTTGAAGGGGTCTTCAATTCTGCTTCTGCTGGGATTTTGATATATATGGCTCTGGTTGATCTTTTAGCAGCAGATTTTATGAACCCAAGATTGCAGAAAAATTTGAAGCTCCAACTAGGGGCAAATATGTCCCTTCTTTTAGGCTCTGGTTGTATGTCTCTGTTGGCCAAATGGGCTTAA 1080 0.438 MITFQASSSTISNLLLVSCGFLLPTLVLGDCTCERDETKRSDSSAVLHYKLGSIASVLVAGALGVSLPLLSKRIPALNPKNDIFFMVKAFAAGVILATGFVHILPDAYESLTSPCLKENPWGKFPFTGFVAMMSSIGTLMVDSFATGFYHRQHFNPSKQVPADEEIADEHAGHIHVHTHATHGHAHGAPLSSQDSETSEVIRQRIISQVLEIGIVVHSVIIGLSLGTAGSIDTIKPLLVALSFHQFFEGMGLGGCISQAEFESKSTAIMATFFSLTTPIGIAIGMGVSSAYKENSSTALTVEGVFNSASAGILIYMALVDLLAADFMNPRLQKNLKLQLGANMSLLLGSGCMSLLAKWA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00844 359 NCBIfam ZIP zinc/iron transport family 33 359 IPR004698 GO:0005385|GO:0016020|GO:0071577
Viun1g00844 359 PANTHER ZINC/IRON TRANSPORTER 46 352 - -
Viun1g00844 359 Pfam ZIP Zinc transporter 48 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00844 Viun-Chr1 10823553 10825466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00844 30 359 Inorganic Solute Cotransporters AT3G12750 65.875 2.78e-157 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00844 K14709 - gmx:100805124 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g00844 1 10823553 10825466 Viun1g00844 1 10823553 10825466 ECH