Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00835 ATGAAAGAGAGTGGCAGAAAACAAGGTACCATGTCGCCATGTGCAGCTTGCAAGCTTCTTCGAAGAAGGTGCACGAGGGATTGTGTGTTTGCTCCTTATTTTCCTGCTGATGAACCTCAGAAGTTTGGTAGTGTGCACAAGGTTTTCGGGGCTAGCAATGTCAACAAAATGCTACAGGAATTACCGGAGCACCAAAGAAGTGATGCAGTAAGTTCAATGGTGTACGAAGCAAATGCAAGAGTGAGAGACCCTGTGTATGGATGTGTGGGAGCCATTTCTTCTCTCCAACAACAAGTTGATGAGCTCCAAACCCAATTGGCTCTGGCACAAGCAGAAGTTGTGCACATGAGAATGAGCCAATTCTCACCACCATCATCAGAACACCACCACCACCACCATCAAGCCTCCCTAGTGCCTCATGAACCCTCCAACTCATCATCGGAAAACATGTTACATTCCAGCAGGGTCTTGTCTTCACAAAGCAAGTCCCTTTTTGGCATGGACATGGTCGTTGACCAGACCATCATGGGGCAATCCTTGTGGTCGTACTAG 552 0.4764 MKESGRKQGTMSPCAACKLLRRRCTRDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDELQTQLALAQAEVVHMRMSQFSPPSSEHHHHHHQASLVPHEPSNSSSENMLHSSRVLSSQSKSLFGMDMVVDQTIMGQSLWSY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00835 183 Coils Coil 92 112 - -
Viun1g00835 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 147 - -
Viun1g00835 183 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Viun1g00835 183 MobiDBLite consensus disorder prediction 120 153 - -
Viun1g00835 183 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Viun1g00835 183 MobiDBLite consensus disorder prediction 138 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00835 Viun-Chr1 10534309 10538996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00835 1 182 AS2 family AT1G31320 64.286 2.27e-68 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun1g00835 LOB 1.4e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00835 - - gmx:100803188 299.286