Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00819 ATGGAATCTAGACTTGATGAATGGCACCAGTCTCGATCACAGCCAGTGACGCAGGACCATTTGGATGGCACACATACCCACAGAAGACCGGTTGACTTTAATACATCAGAAGTTAAACCTGTACTTAATTACTCTATACAGACAGGTGAAGAATTTGCTCTTGAGTTTATGAGAGATAAGGTGAATATGAGGAAGCCTGTATTATCAAATGTCAGTGATTCTAATTATAACCCAGGTTATATGGAACTGAAAGGCATTTTAGGCATCAGCCATGCAGGATCTGAAAGTGGATCTGATATCTCTATGCTTTCAATGGCTGAGAAATATCCAAAAGAATTTGATAGAACGAGTACATCTTTACCTGGAGACAGAATAAACTATGGGTCAATTCGATCAATGCCAAGAACTTCATTGAATCAGGATAATAGACAATTTGTGCCTGGGTATGGCTCTTTTGGAGCTTATGATAGATCAATGATTATGAAGTTTCTTTGCAGCTTTGGCGGTAGAATATTGCCACGACCATGTGATGGAAATCTAAGGTATGTTGGAGGCCAAACACGTATTCTTCGACTAAGAAAGGACATATCTTGGCTGGAGCTCATGCAGACAGCGTTACAAATCTATAGTCAGGTTTATGCAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATCTGATGAAGATTTGCAGAATATGATGGAGGAATGTAGTCATCTACAAGATAGGGAAGGATCACAAAAACCTAGGATGTTTTTGTTCTCAATGAGTGATTTGGAGGATGCTCAATTTGGTCTCAGCAGTATGGGTGATGATTCTGAGATTCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAAAAGCACTACAATGATTGGTGTCAGCGTTTCTGCAAATGACATAAATGAATTGGACAGGCAAAGTATTGACAGGGAGACTAATAATAGAGTTGGTATAGAATCTATTGTACAAGGAAATCCTCCCCCAACTAACAATTTTGACTCATCATTGGCTTCTCAATTTTCACCATCGGTGCTACCAACTTCCTCAAATTCTTATGAAAAGTATCCACTGTTTTATGGTGATCAAATGATGTGCCATGGGGAACTTAGTGATCACTACTTTATTAATCACGGCCTTGATCCTTCTCATAAACCTGTTATTGGAGAGACCCCGATGATTATGCCTCCCCATATGCTTGTCAATCAACAAGGGATTTTGAATGAAGGCCTTCCACCTCGAGGAATACAAGTACAACATTCAGAAATACCAACAACATTGGCAAACAAGATGGTTACTAGTTCAATTCCACAAGTAAGTGACCCTGGGAAAGTTTTGGCCTCAGAATTACCATCACCTGCCCCTACTCAACTGCTTAATGGTTACATGAAAAATAATTTTCCTGAAGCATCTGTTGTAGTTGCTGCACCAGAGGGGTTTTCATTGCATCCACCAAGCGTGGACAAGCGCCAAGATTATGAAGAGACTTCTTCTACAAGTAGCAGTGCATTTGGTCCTACTTGTGTTGATTCACACTCCAATGCTTCTGACTTGAGTTCCCTTCATCCCCCTCCTCTTCCCAAGAGAGTTTACTATTCAGAGAGAATTCCACGGGAACAAGTAGAGTTGCTGAACCGGTCATCAAAATCTGATGATACACACAGCTCTCAGTTTCATGTTCCAGATTTACTCTCTGATATCAACCCACCAGATTTAGTTACAGAATCTGTTGACAAGTTGCGTGATGGAAATCTGTCTGATCGAAATGGGGAATTAAGCATCACAGAAAATCCATTGCATGCAAATGTATTTGCAGTTGATAATGGGATTGTCAATAATCAAATATACAAACAGCCGCCTGATACAAACACTCAGATAAAATCAAAGCTAACTGAGCATGTGAATCCTGAGCAGAGGCAAGTATTATCAGACAATGAAGGACACACAGATGTGTTAAATAAAGAAAATGTTGTTGGGTTGGAAATGAAAATTAATGGTAACAATAGCTATAACAAACCCCTGATTGATGAGACAAAAGCCAGTAAACCTGACTTGCAGAATTTGCACCAGGTTTCTTCTGGTAAGAATCTTGATGATCCTGCATCCACTCTTCCAGAGGTTGATTGGGGTGATACCTCTGTGAAGGAGTCTAATGATGTGCAAGCCTTACCGGTATCTCTAAATGGGAATATTGATGATGACTCTGAAGAATTTCCTTCTGATGTCATTACAAAACAAGCACATGGTGACATCCTTATTGATATTAATGATCGGTTTCCCCGTGAATTTTTCACTGATATATTCTCTAAAGCAGTACTTGAAGAAGACCCCTCTAGTTTCCATCAATTAAATTCAAATGGAGTGGGCTTAAGCGTAAACATGGAAAACTGTGATCCTAAACGATGGTCGTATTTTCAAAAATTGGCTCAAGCGGGCATTGATAATGTGTCCCTTATTGACCAAGATCATCTTGGTTTTGCACCTGCGACAGGAAAAGTGGTTGGAGATGATAGAGCTCAACATGTTACACCTTTAACAACTGATGAAGTTTCTCTGAACCATGCAGAGTCCCACCTCGATTTTGTTGAAGAAAATTTGCTAGGAAGAATTGGAGCACAAAGAAAGTCTAACTATGATCACTCCCAAGTGAACGACACTGAAAGCATGCAATTTGATGCCATGATGGAAAACATAAGAGCTCAAGAGTCCGAAGGCGAGGTTGGGATGTTTGAAAAAAGGAATAACAATCTACATCCTCTTGATTCTTCTTTGGAAGAGATTGATACGAGTTCTTTGCAGGTCATAATGAATGACGATCTTGAAGAGCTGAAGGAACTGGGTTCTGGTACCTTTGGCACCGTGTATCATGGAAAATGGCGAGGAACAGATGTTGCCATCAAAAGAATAAAGAAAATCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGATATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTAGTGGAGGATGGACCCGGAGGAACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTGTTACTTCGCAAGGATAGGTATCTTGATTTTCGTAAGAGACTGATAATTGCGATGGACGCAGCTTTTGGAATGGAATATTTACACTCAAAAAATATTGTACACTTTGACCTAAAATGTGACAATTTGTTGGTGAACTTGAAAGATCCTATGCGGCCTATATGCAAGGTTGGGGATTTTGGATTGTCAAAAATTAAAAGAAATACCTTGGTTTCTGGTGGTGTGAGGGGCACTCTTCCTTGGATGGCACCAGAGCTTCTGAATGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTCTTATGGGAGATTCTAACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTGAATAACACATTAAGACCAACAATACCAAATCACTGTGATTCTGAATGGAGAACACTGATGGAGCAGTGTTGGGCACCCAATCCTGCGGCTAGGCCCTCCTTCACAGAAATAGCTGGTCGATTGCGCATAATGTCTGCAGCTGCCAAATCATCGGGTCAAAAAACATCTAGATGA 3687 0.4074 MESRLDEWHQSRSQPVTQDHLDGTHTHRRPVDFNTSEVKPVLNYSIQTGEEFALEFMRDKVNMRKPVLSNVSDSNYNPGYMELKGILGISHAGSESGSDISMLSMAEKYPKEFDRTSTSLPGDRINYGSIRSMPRTSLNQDNRQFVPGYGSFGAYDRSMIMKFLCSFGGRILPRPCDGNLRYVGGQTRILRLRKDISWLELMQTALQIYSQVYAIKYQLPGEDLDALVSVSSDEDLQNMMEECSHLQDREGSQKPRMFLFSMSDLEDAQFGLSSMGDDSEIQYVVAVNGMDLGSRKSTTMIGVSVSANDINELDRQSIDRETNNRVGIESIVQGNPPPTNNFDSSLASQFSPSVLPTSSNSYEKYPLFYGDQMMCHGELSDHYFINHGLDPSHKPVIGETPMIMPPHMLVNQQGILNEGLPPRGIQVQHSEIPTTLANKMVTSSIPQVSDPGKVLASELPSPAPTQLLNGYMKNNFPEASVVVAAPEGFSLHPPSVDKRQDYEETSSTSSSAFGPTCVDSHSNASDLSSLHPPPLPKRVYYSERIPREQVELLNRSSKSDDTHSSQFHVPDLLSDINPPDLVTESVDKLRDGNLSDRNGELSITENPLHANVFAVDNGIVNNQIYKQPPDTNTQIKSKLTEHVNPEQRQVLSDNEGHTDVLNKENVVGLEMKINGNNSYNKPLIDETKASKPDLQNLHQVSSGKNLDDPASTLPEVDWGDTSVKESNDVQALPVSLNGNIDDDSEEFPSDVITKQAHGDILIDINDRFPREFFTDIFSKAVLEEDPSSFHQLNSNGVGLSVNMENCDPKRWSYFQKLAQAGIDNVSLIDQDHLGFAPATGKVVGDDRAQHVTPLTTDEVSLNHAESHLDFVEENLLGRIGAQRKSNYDHSQVNDTESMQFDAMMENIRAQESEGEVGMFEKRNNNLHPLDSSLEEIDTSSLQVIMNDDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVEDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDFRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPMRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNHCDSEWRTLMEQCWAPNPAARPSFTEIAGRLRIMSAAAKSSGQKTSR 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00819 1228 MobiDBLite consensus disorder prediction 554 579 - -
Viun1g00819 1228 SMART PB1_new 175 262 IPR000270 GO:0005515
Viun1g00819 1228 Pfam PB1 domain 177 260 IPR000270 GO:0005515
Viun1g00819 1228 Pfam Protein tyrosine and serine/threonine kinase 950 1211 IPR001245 GO:0004672|GO:0006468
Viun1g00819 1228 MobiDBLite consensus disorder prediction 491 535 - -
Viun1g00819 1228 Gene3D Transferase(Phosphotransferase) domain 1 1037 1228 - -
Viun1g00819 1228 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1037 1228 - -
Viun1g00819 1228 MobiDBLite consensus disorder prediction 505 529 - -
Viun1g00819 1228 Gene3D Phosphorylase Kinase; domain 1 942 1036 - -
Viun1g00819 1228 ProSiteProfiles Protein kinase domain profile. 949 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g00819 1228 MobiDBLite consensus disorder prediction 1 31 - -
Viun1g00819 1228 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 180 262 - -
Viun1g00819 1228 PRINTS Tyrosine kinase catalytic domain signature 1031 1044 IPR001245 GO:0004672|GO:0006468
Viun1g00819 1228 PRINTS Tyrosine kinase catalytic domain signature 1068 1086 IPR001245 GO:0004672|GO:0006468
Viun1g00819 1228 PRINTS Tyrosine kinase catalytic domain signature 1139 1161 IPR001245 GO:0004672|GO:0006468
Viun1g00819 1228 PRINTS Tyrosine kinase catalytic domain signature 1183 1205 IPR001245 GO:0004672|GO:0006468
Viun1g00819 1228 SUPERFAMILY CAD & PB1 domains 177 264 - -
Viun1g00819 1228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1074 1086 IPR008271 GO:0004672|GO:0006468
Viun1g00819 1228 PANTHER SERINE-THREONINE PROTEIN KINASE 205 1213 - -
Viun1g00819 1228 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 942 1036 - -
Viun1g00819 1228 CDD STKc_MAP3K-like 955 1212 - -
Viun1g00819 1228 Gene3D - 181 261 - -
Viun1g00819 1228 ProSitePatterns Protein kinases ATP-binding region signature. 955 980 IPR017441 GO:0005524
Viun1g00819 1228 SUPERFAMILY Protein kinase-like (PK-like) 932 1210 IPR011009 -
Viun1g00819 1228 CDD PB1_UP2 164 260 - -
Viun1g00819 1228 SMART serkin_6 949 1215 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00819 Viun-Chr1 10240004 10249929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00819 14 567 MAP Kinase Kinase Kinase AT1G16270 37.421 1.19e-86 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Viun1g00819 PK_Tyr_Ser-Thr 3.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00819 - - gmx:100799639 2025.75