Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00816 ATGGCGGCGCCGAATAGAATCGAACGCGCTCACCAGATGTACCGGGAAGGACGATACGAGGAGGCGTTAGGGTTCTACACAGAGGCAATCGCCATGGCCAAGACTAACCCTCAGAAGATCGCGTTGCATAGCAATCGAGCCGCGTGCTTTCTGAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACCTCGGTGCTTGAGCTTGATCACAAGCACAGCGGGGCATTGATGCTACGGGCTCAAACGCTTGTCACCTTGAAGGAGTATCATTCAGCTCTTTTTGATGTCAACAGACTGTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCAAGCTCGCTTGAAGACGCAGTTGTCACTTGCTCCAATACCAGAATCAGAAGAGGAGTTTGAAGAACAGGAAGACGAGGAGCCTGAAGTGATAATTGAAGAGGAGAATGAAAAAGAAGAGATAGGAGAGAAATATTCTTCGATTTCTAATATTATGACAGAACAGAAGGATGAACTCGGTAAAGGCATTGTTATTACCGAATGTGCTGCTCATGAAGCAGAGCCCAAGTTTTCAATGAAGCAAGGGGGAAAGCAAAACCATGACTCTAAGAAGTTCATAGCAGATGCTATAGCTCCTAAAGCACCAAGCAGGGAATCCAATGAGGAACATTCAAAAGGATGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTAGACTACGCACGGTGGGATAGTGTTGAAGATGATTCTAGTGATGATGATGGTGACAGTGAAGAAGAAGAATCTTTACCTCAATACCGGTTTCGTGTAAGAACAATTGGTGTACGTCCTGTAAAGTGA 843 0.4472 MAAPNRIERAHQMYREGRYEEALGFYTEAIAMAKTNPQKIALHSNRAACFLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARLKTQLSLAPIPESEEEFEEQEDEEPEVIIEEENEKEEIGEKYSSISNIMTEQKDELGKGIVITECAAHEAEPKFSMKQGGKQNHDSKKFIADAIAPKAPSRESNEEHSKGWQTIPKPKGHSALDYARWDSVEDDSSDDDGDSEEEESLPQYRFRVRTIGVRPVK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00816 280 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 280 - -
Viun1g00816 280 MobiDBLite consensus disorder prediction 188 207 - -
Viun1g00816 280 MobiDBLite consensus disorder prediction 188 267 - -
Viun1g00816 280 Pfam Anaphase-promoting complex, cyclosome, subunit 3 17 94 - -
Viun1g00816 280 SUPERFAMILY TPR-like 7 121 IPR011990 GO:0005515
Viun1g00816 280 MobiDBLite consensus disorder prediction 247 261 - -
Viun1g00816 280 SMART tpr_5 40 73 IPR019734 GO:0005515
Viun1g00816 280 SMART tpr_5 74 107 IPR019734 GO:0005515
Viun1g00816 280 SMART tpr_5 3 36 IPR019734 GO:0005515
Viun1g00816 280 MobiDBLite consensus disorder prediction 215 229 - -
Viun1g00816 280 Gene3D Tetratricopeptide repeat domain 2 154 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00816 2 121 Calmodulin-binding Proteins AT3G25230 32.576 2.30e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00816 - - vum:124846515 451.44