Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00813 ATGGCTTCGACCCTTTTCTCAAAGATGCTTTCGGGTCATCGATTGATCCACCATTCGTCGTTCCTCACTCAGCAGCCACAGTTTCTCTCTTCCTTATTCAGTAAACGGCTGTTTTGTATACAAACTGTCTCGGTCCCAGTTTCTACATCCAAAAACAGCAAAACAACTGGTTGGGTTCCTTGTATGGCTTCTTCCTCAGTTGGTAGAAGAGCTGCATATTCTACACAATCTGTATCAACAAATGAGCCAGTTGTTTCTGTTGATTGGCTTTATGATAACCTGAAGATGCCAGATATCAAGGTACTGGATGCTTCATGGTACATGCCAGATGAACAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCGGGTGCCCTTTTCTTTGACGTAGATGGAATAGCAGATCGTACTACAAAGTTACCACACATGCTGCCATCTGAGGAAGCTTTTGCTGCTGCTGTTTCTGCCCTTGGCTTAGAGAACAAAGATGATTTGGTTGTTTATGATGGAAAAGGGTTATTTAGTGCAGCTCGTGTTTGGTGGATGTTCCGAGTATTTGGGCATGACAGAGTTTGGGTGTTAGATGGTGGCCTGCCAAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCTTCAAGTGATGCCATTCTTAAAGCCAGTGCTGCAAGTGAGGCTATTGAGAAAGTATATAAAGGACAAACAGTTGGCCCACTCACATTCGAGACTAAATTTCAGCCACATCTTGTTTGGAACCTTGATCAGGTAAAGAAAAATATAGAGGACAAAACTCACCAACACATAGATGCCCGATCAAAGCCGAGGTTTGATGGAGCTGTTCCAGAGCCCAGAAAGGGAATCAGAAGTGGTCATGTACCTGGCAGCAAGTGCATTCCTTTTGGCCAGATGTTAGATAGTTCATATACATTGTTACCAACAAATGAGCTGAAGAAGCGATTTGAACAAGAAGGAATCTCTCTCGATAGCCCTGCTGTTACTTCATGTGGAACAGGCGTAACTGCTTGCATTCTTGCATTGGGTCTGCATCGTCTTGGAAAGTCTGATGTTGCAGTTTATGATGGATCTTGGACCGAATGGGGAGCACAAGCTGATACACCTGTTGAAATTTCATAA 1140 0.436 MASTLFSKMLSGHRLIHHSSFLTQQPQFLSSLFSKRLFCIQTVSVPVSTSKNSKTTGWVPCMASSSVGRRAAYSTQSVSTNEPVVSVDWLYDNLKMPDIKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFAAAVSALGLENKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYKGQTVGPLTFETKFQPHLVWNLDQVKKNIEDKTHQHIDARSKPRFDGAVPEPRKGIRSGHVPGSKCIPFGQMLDSSYTLLPTNELKKRFEQEGISLDSPAVTSCGTGVTACILALGLHRLGKSDVAVYDGSWTEWGAQADTPVEIS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00813 379 ProSitePatterns Rhodanese signature 1. 119 130 IPR001307 GO:0004792
Viun1g00813 379 FunFam Sulfurtransferase 248 379 - -
Viun1g00813 379 CDD TST_Repeat_2 254 370 - -
Viun1g00813 379 PANTHER THIOSULFATE SULFERTANSFERASE 79 378 IPR045078 GO:0016783
Viun1g00813 379 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 82 214 IPR036873 -
Viun1g00813 379 ProSitePatterns Rhodanese C-terminal signature. 358 368 IPR001307 GO:0004792
Viun1g00813 379 Gene3D - 249 377 IPR036873 -
Viun1g00813 379 CDD TST_Repeat_1 84 207 - -
Viun1g00813 379 ProSiteProfiles Rhodanese domain profile. 95 212 IPR001763 -
Viun1g00813 379 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 256 377 IPR036873 -
Viun1g00813 379 Pfam Rhodanese-like domain 256 370 IPR001763 -
Viun1g00813 379 Pfam Rhodanese-like domain 86 205 IPR001763 -
Viun1g00813 379 FunFam Sulfurtransferase 77 219 - -
Viun1g00813 379 ProSiteProfiles Rhodanese domain profile. 263 377 IPR001763 -
Viun1g00813 379 Gene3D - 76 219 IPR036873 -
Viun1g00813 379 SMART rhod_4 253 374 IPR001763 -
Viun1g00813 379 SMART rhod_4 85 209 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00813 62 377 Sulfurtransferasese or Rhodanese AT1G79230 79.430 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00813 K01011 - gmx:100798053 706.442