Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00764 ATGTGGGTTCTATGTCTTGCAACATTGATTGTTATAAGCATTACACATTGGGTTTATAGATGGAGAAACCCCAGTTGCAATGGAAAACTCCCACCTGGTTCATTGGGTTTTCCCCTTCTTGGTGAATCCCTTCAGTTCTTCACCCCGTACACTTCTTCTGATATTAATCCATTCATAAAGCAGAGAATGAACAGGTATGGACCAATCTTCAAGACCGGCTTTGCTGGACGACCAACTGTGGTGTCCACTGACCCAAAGTTTAATCACTTAATATTCCAACAAGAAGGAGAAATGTTCAAGAGCTGGTACCCAGACACACTAAACGAGATTCTTGGGAAACAAAATTTAGGTTCCCTGCATGGTGTTGTGTTCAAGTACGTTAAGAACATGGTGTTCAAAATGTTTGGTCCTGAAGGCCTCAAAAGGATGCTCTCAGAGGTTGACCAGAAAGCGTGCACAACATTGCAGCAGTGGTCATGTCAGGATGCTGTTGAGTTGATGGATGCAACAAAAAGGATGATATTTGATTTGACTGCCAAAAAACTTCTCAGCTGTGATTCAAAAGAGACTTTGGAGAGTCTAATGGCCAACTTTGTTTCATTTATGGAAGGACTTATCTCACTCCCTCTCTACATTCCCGGAACAGCTTATTACAAATGTTTGCAGGGTAGGAAAAGGGCGATGAAGAAACTGAAGAAGATGCTGCATGAAAGAAGAGAAGAGCCTAGGAAAGAAGAAAGCGACTTTTTTGATTTTGTTGTGGAAGAACTTTCAAAAGAGGGAACACTACTGAATGAAGAGATCGCTTTGGACCTCATGTTTTCACTGCTCTTTGCAAGCTTTGAAACCACTTCTTTGGCTCTCACTTATGCCATTAAAGCACTCTCTGACCATCCCTCAGTCCTCAAGCGATTAGAAGAAGAACATGAAGCCATCCTGAAAGGTCGTGAAGATCCAAACTCTGGACTTACATGGCAAGAGTACAAATCAATGAAATTCACACTTCAGGTCATAAATGAAACGATAAGGCTCGCAAACATAGTTCCAGGAATATTTCGGAAGACAATCCAGGAAGTTAAATATGGAGGATACACCATACCAGAAGGGTGGGCAATAATGATTTGTCCTCCAGCTGTACACTTGAACCCAACCTTATACGAAGATCCCCTTTCCTTCAATCCATGGAGATGGGAGGGAATGGAAATGAGTGGCGCCAGCAAACATTTCATGGCTTTTGGCGGAGGCATGAGATTTTGTGTTGGGGCAGACTTTGCGAAGGTTCAGATGGCTGTTTTTCTTCATAACTTGGTGACAAAGTACAAGTGGCGACCCATCAAAGGAGGCAATATTGTTCGAAATCTTGGGCTACGATTTCCTGATGGCTTTTATGTCCGGATAACGGAGAAAGATCCATGGAAGTATGAATCAGAATGA 1434 0.4247 MWVLCLATLIVISITHWVYRWRNPSCNGKLPPGSLGFPLLGESLQFFTPYTSSDINPFIKQRMNRYGPIFKTGFAGRPTVVSTDPKFNHLIFQQEGEMFKSWYPDTLNEILGKQNLGSLHGVVFKYVKNMVFKMFGPEGLKRMLSEVDQKACTTLQQWSCQDAVELMDATKRMIFDLTAKKLLSCDSKETLESLMANFVSFMEGLISLPLYIPGTAYYKCLQGRKRAMKKLKKMLHERREEPRKEESDFFDFVVEELSKEGTLLNEEIALDLMFSLLFASFETTSLALTYAIKALSDHPSVLKRLEEEHEAILKGREDPNSGLTWQEYKSMKFTLQVINETIRLANIVPGIFRKTIQEVKYGGYTIPEGWAIMICPPAVHLNPTLYEDPLSFNPWRWEGMEMSGASKHFMAFGGGMRFCVGADFAKVQMAVFLHNLVTKYKWRPIKGGNIVRNLGLRFPDGFYVRITEKDPWKYESE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00764 477 Gene3D Cytochrome P450 22 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 FunFam Cytochrome P450 family protein 22 468 - -
Viun1g00764 477 Pfam Cytochrome P450 31 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 CDD CYP90-like 62 468 - -
Viun1g00764 477 PANTHER CYTOCHROME P450 26 29 443 - -
Viun1g00764 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Viun1g00764 477 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 SUPERFAMILY Cytochrome P450 24 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 PRINTS E-class P450 group IV signature 364 378 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 PRINTS E-class P450 group IV signature 419 437 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 PRINTS E-class P450 group IV signature 331 347 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 PRINTS E-class P450 group IV signature 57 80 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 PRINTS E-class P450 group IV signature 380 398 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g00764 477 PRINTS E-class P450 group IV signature 403 419 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00764 Viun-Chr1 8109248 8115584 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00764 1 469 Cytochrome P450 AT1G12740 65.546 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00764 - - gmx:100794607 729.939