Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00740 ATGATGCCAGGCAATGGACAGTTAACAGTTCCTCCTGGCTTCAGGTTCCATCCTACTGATGAAGAGCTTCTCTATTATTACCTGAGGAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTCATAAGAGAAGTGGATCTCAACAAACTTGAGCCTTGGGACCTCAAAGACAAATGTAGGATTGGTTCAGGGCCTCAGAATGAGTGGTACTTCTTCAGCCACAAGGATAAGAAATACCCAACAGGAACAAGAACAAATCGAGCAACTACAGCTGGTTTTTGGAAAGCAACTGGAAGAGACAAGGCCATATACCACACTAATTCCAAGAGGATTGGCATGAGGAAAACCCTAGTTTTCTACACTGGTCGTGCTCCTCATGGCCAGAAAACTGATTGGATCATGCATGAGTATCGCCTTGATGAAGATGATGCTGATGTTCAGGAAGATGGGTGGGTGGTATGCAGGGTTTTCAAAAAGAAAAACCAGAATCGAGGTTTCCAGCAAGACATTGAAGAAGAAGAGAACTTAACCCACATGAGAACAAGTGGTCCTTGCCATGTTCTGGAACCAAAACATCATATGCAAGGAGGATTATATGACTACAACTTTGACGGCACAATGCAGCTTCCACAGTTGTTCAGTCCAGAATCAGCTGTTGCACCAACCACTACTTGCTTGGCGACATCCATGAATGCCATGGACATCCTTGAGTGCTCTCAAAACCTGTTGAGGCTCACAACTAATGGGTGTGGACTGAATCTTATGCAGCAACAGGGAGAGAGGTTCAGTGGTGATTGGTCATTCTTGGATAAGCTTCTAGCATCTCACCATGGCATGGATCATCATCAGCATCATCCACAAAGCAAATGTAACCCTCCCACTCACCATGCTGCAACTTCTGTTGGCACTTCAGCTCAGAAATTCCCATTCCATTACCTTGGCTGTGACACTCATGATATCATGAAATTTTCCAAGTAG 978 0.4427 MMPGNGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDADVQEDGWVVCRVFKKKNQNRGFQQDIEEEENLTHMRTSGPCHVLEPKHHMQGGLYDYNFDGTMQLPQLFSPESAVAPTTTCLATSMNAMDILECSQNLLRLTTNGCGLNLMQQQGERFSGDWSFLDKLLASHHGMDHHQHHPQSKCNPPTHHAATSVGTSAQKFPFHYLGCDTHDIMKFSK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00740 325 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Viun1g00740 325 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Viun1g00740 325 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Viun1g00740 325 MobiDBLite consensus disorder prediction 277 299 - -
Viun1g00740 325 FunFam NAC domain-containing protein 19 163 - -
Viun1g00740 325 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Viun1g00740 325 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00740 Viun-Chr1 7557707 7560526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00740 2 325 NAC Transcription Factor Family AT1G79580 52.632 6.64e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun1g00740 NAM 2.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00740 - - vun:114178728 682.174