Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00718 ATGGAAGGCAAAGGTTTAGGAGAAGTGAGAAGGCTTCACATCATTTACTTCCTCAGTCAGATAGGTGGTCGTGCAGATCATCCTCATCTAATTCGTGTTCTTCATCTTACTCGTAATGGGGTTTATCTCAGAGATGTCAAGAGATGGCTTGGGGAATTGAGAGGGAAAGACTTGCCTGAGGCATTTTCTTGGTCCTACAAGAGAAGGTACAAGAGTGGATATGTGTGGCAAGACTTGCTGGATGACGACCTCATAACCCCCATCTCTGACAATGAATACATCCTCAAAGGATCACAAATCCACACTACCCCATTTGCAACAACTCCTTCACTAGAAGAAAAGAAAGCTGCAGTTTGTGATATCAATGCTGAAAAGATGTGTCCTCAGTTACAAGTTGTAGAGGACAAAGAACACCAGCATCAGCAGCAGCGGAAGCCGCCACAGTCTCTAGCAGAAGAAGAATCTCAGGTTCAAACAGACCAGAATTCGAAAACAAATTCTCCAACAAAAGGGTCATCAGAAATCAGTCAGGACTCGTTGGTCTTCAGCTCAGACAGGTCGTCTGTGACAGATGATGACTCTTCTAAGGTTGAAGAAGAGAAGCACTTAGACATCACAAGAGGCAAAGAGAGTTTCAGTGAAATGCACCAAGAGAAATTAGAGACTTGCTCATTGCCTTCCCTGTATCACAATCTGTTGAGTAAGAAAGGCATTCACAAAGATGACCAGAATAAGACTCACTCACCTGATTCATCCCTGTCCACCATATCCTCATCATCATCTCAATCATCCTTCACTAAGATCAGAAGCAATTCTACTAAAGTCTCTAATATTTTTCGAAATTGGATCACTTGTGGCACAGTGGAAACAAATGATGCAGCACTCATCCTGATGAACCCGGGTCAAACAAAAATTTCGAAGGAACCCAGCAACATGCCTGAAACAAAAGCTGAGATTTGTAAGGGAGACCGGTTGGGAGGATCAGAGAGGTGCTTTAGGACTTCTTGGGGTCATCAAGACCAGAAACAGCAATATGGCGCAAGAAAAAGCTTTGATGGAGAGGAAACAAACAGGAGCAGGAAAAAGTTAGGCGACTTGCTTAATCAAAGCTCTTGCAAACCATTTGGTGGACCAATTTGCTCGCAATGTGGGAAGTCGTTTAAGCCTGAGAAAATGTACAAACACATGAAGTCTTGTAAAGGAATGAAAGCCTTGGGAAAGTCAGCTCCAAATGTTGAGGAGGCACAGCTTCCGAGATCATCAACTTCATCCCATACACATTACTTTTTGACCAACTAA 1299 0.4319 MEGKGLGEVRRLHIIYFLSQIGGRADHPHLIRVLHLTRNGVYLRDVKRWLGELRGKDLPEAFSWSYKRRYKSGYVWQDLLDDDLITPISDNEYILKGSQIHTTPFATTPSLEEKKAAVCDINAEKMCPQLQVVEDKEHQHQQQRKPPQSLAEEESQVQTDQNSKTNSPTKGSSEISQDSLVFSSDRSSVTDDDSSKVEEEKHLDITRGKESFSEMHQEKLETCSLPSLYHNLLSKKGIHKDDQNKTHSPDSSLSTISSSSSQSSFTKIRSNSTKVSNIFRNWITCGTVETNDAALILMNPGQTKISKEPSNMPETKAEICKGDRLGGSERCFRTSWGHQDQKQQYGARKSFDGEETNRSRKKLGDLLNQSSCKPFGGPICSQCGKSFKPEKMYKHMKSCKGMKALGKSAPNVEEAQLPRSSTSSHTHYFLTN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00718 432 MobiDBLite consensus disorder prediction 414 432 - -
Viun1g00718 432 MobiDBLite consensus disorder prediction 134 212 - -
Viun1g00718 432 MobiDBLite consensus disorder prediction 248 267 - -
Viun1g00718 432 MobiDBLite consensus disorder prediction 410 432 - -
Viun1g00718 432 Pfam Protein SOSEKI, plant 13 309 IPR010369 -
Viun1g00718 432 MobiDBLite consensus disorder prediction 239 267 - -
Viun1g00718 432 MobiDBLite consensus disorder prediction 189 212 - -
Viun1g00718 432 MobiDBLite consensus disorder prediction 144 188 - -
Viun1g00718 432 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 7 414 IPR010369 -
Viun1g00718 432 MobiDBLite consensus disorder prediction 336 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00718 Viun-Chr1 7083562 7086852 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun1g00718 DUF966 5.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00718 - - vun:114179809 848.195