Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00712 ATGTATTCAATGGCAATGGAATCATCAAAAGGGTACTCACACTATACAAAGGAGGATCTACACATCATGAAAAGCAAAAGCAAGAAGAACAACACACCAAGAGAAATTGAAATGGAAGGCAAAGGTTTAGGAGAAGTGAGAAGGCTTCACATCATTTACTTCCTCAGTCAGATAGGTGGTCGTGCAGATCATCCTCATCTAATTCGTGTTCTTCATCTTACTCGTAATGGGGTTTATCTCAGAGATGTCAAGAGATGGCTTGGGGAATTGAGAGGGAAAGACTTGCCTGAGGCATTTTCTTGGTCCTACAAGAGGTACAAGAGTGGATATGTGTGGCAAGACTTGCTGGATGACGACCTCATAACCCCCATCTCTGACAATGAATACATCCTCAAAGGATCACAAATCCACACTACCCCATTTGCAACAACTCCTTCACTAGAAGAAAAGAAAGCTGCAGTTTGTGATATCAATGCTGAAAAGATGTGTCCTCAGTTACAAGTTGTAGAGGACAAAGAACACCAGCATCAGCAGCAGCGGAAGCCGCCACAGTCTCTAGCAGAAGAAGAATCTCAGGTTCAAACAGACCAGAATTCGAAAACAAATTCTCCAACAAAAGGGTCATCAGAAATCAGTCAGGACTCGTTGGTCTTCAGCTCAGACAGGTCGTCTGTGACAGATGATGACTCTTCTAAGGTTGAAGAAGAGAAGCACTTAGACATCACAAGAGGCAAAGAGAGTTTCAGTGAAATGCACCAAGAGAAATTAGAGACTTGCTCATTGCCTTCCCTGTATCACAATCTGTTGAGTAAGAAAGGCATTCACAAAGATGACCAGAATAAGACTCACTCACCTGATTCATCCCTGTCCACCATATCCTCATCATCATCTCAATCATCCTTCACTAAGATCAGAAGCAATTCTACTAAAGTCTCTAATATTTTTCGAAATTGGATCACTTGTGGCACAGTGGAAACAAATGATGCAGCACTCATCCTGATGAACCCGGGTCAAACAAAAATTTCGAAGGAACCCAGCAACATGCCTGAAACAAAAGCTGAGATTTGTAAGGGAGACCGGTTGGGAGGATCAGAGAGGTGCTTTAGGACTTCTTGGGGTCATCAAGACCAGAAACAGCAATATGGCGCAAGAAAAAGCTTTGATGGAGAGGAAACAAACAGGAGCAGGAAAAAGTTAGGCGACTTGCTTAATCAAAGCTCTTGCAAACCATTTGGTGGACCAATTTGCTCGCAATGTGGGAAGTCGTTTAAGCCTGAGAAAATGTACAAACACATGAAGTCTTGTAAAGGAATGAAAGCCTTGGGAAAGTCAGCTCCAAATGTTGAGGAGGCACAGCTTCCGAGATCATCAACTTCATCCCATACACATTACTTTTTGACCAACTAA 1407 0.4264 MYSMAMESSKGYSHYTKEDLHIMKSKSKKNNTPREIEMEGKGLGEVRRLHIIYFLSQIGGRADHPHLIRVLHLTRNGVYLRDVKRWLGELRGKDLPEAFSWSYKRYKSGYVWQDLLDDDLITPISDNEYILKGSQIHTTPFATTPSLEEKKAAVCDINAEKMCPQLQVVEDKEHQHQQQRKPPQSLAEEESQVQTDQNSKTNSPTKGSSEISQDSLVFSSDRSSVTDDDSSKVEEEKHLDITRGKESFSEMHQEKLETCSLPSLYHNLLSKKGIHKDDQNKTHSPDSSLSTISSSSSQSSFTKIRSNSTKVSNIFRNWITCGTVETNDAALILMNPGQTKISKEPSNMPETKAEICKGDRLGGSERCFRTSWGHQDQKQQYGARKSFDGEETNRSRKKLGDLLNQSSCKPFGGPICSQCGKSFKPEKMYKHMKSCKGMKALGKSAPNVEEAQLPRSSTSSHTHYFLTN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00712 468 MobiDBLite consensus disorder prediction 225 248 - -
Viun1g00712 468 MobiDBLite consensus disorder prediction 372 394 - -
Viun1g00712 468 MobiDBLite consensus disorder prediction 450 468 - -
Viun1g00712 468 MobiDBLite consensus disorder prediction 170 248 - -
Viun1g00712 468 MobiDBLite consensus disorder prediction 275 303 - -
Viun1g00712 468 MobiDBLite consensus disorder prediction 284 303 - -
Viun1g00712 468 MobiDBLite consensus disorder prediction 446 468 - -
Viun1g00712 468 MobiDBLite consensus disorder prediction 180 224 - -
Viun1g00712 468 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 36 450 IPR010369 -
Viun1g00712 468 Pfam Protein SOSEKI, plant 50 345 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00712 Viun-Chr1 7083562 7094656 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun1g00712 DUF966 7.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00712 - - vun:114179809 915.99