Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00654 ATGGAAAACCACCAAAACCACAAGGGAGAGGCAGAACCTGACAGAGAGAAGAACCAAAACCATAACCAAGCGTGGGGCACGTGGGAGGAGTTGTTGCTAGCGTTCGCTGTGAACCGCCATGGCTTCAAGGACTGGGACACCGTCGCCATGGAGGTTCAGTCGCGCGCCACGCGCCTCCTCGCCACGGCGCGCCACTGTGAGCAGAAATTTCACGATCTCAGCCGCCGATTCGCCGACCAATGCAACGACGGTGTTACGCCGCCGCAACAGAACGGCGAGGCCGCCGGGGACAACTCCGATCACGTCCCGTGGCTGGACGAATTGAGGAAACTCCGCGTCGCCGAGCTCCGCCGCGAGGTCCAGCGGCGCGACGATTCCATTTTGTCGCTGCAGTTGGAGGTGAAGAGACTGGAGGAGGAGAAAGAGAATGACGGTAAAGACGACGAGAAACCAGATCTGGCGGTTCCCGGCGAAGCACGTCCGGAAAACGACAAAACCGGCGGAGAAGTTGAGGAGGTTGGACCGGCGAATTCCGGACCGGAGAGAACCGCGAACGCTGACAAGATGTTGCCAACAACGGGCGACGAATCGGACCGGGAGAATCAGTCAGTTAACGAGTCTAACTCGACCGGTTCGAGGTTTGATAAAACCGGAGAAGGTGACGCAAAGTTAAGAGTCGAACCGGATCCGGTTCAGACCGGTTCAAAAGAAGCGGACCCGGTTGCGAGGAAGGGAAAACCGGTTGGGGAGGAATCAAATAACGGAAGCTACGATGCGTTGGCGAAGGTGCCAACGTGTGAGTCGGTGCCTCCGAGTGACGAGAGGAAGGTGGAGCAGGACGATGACTCGTCTGAGTTGCACGACTCAGTGGCTCACTCCGGGGAGGGAGGGACTAGGGAGAGCAGCGAGGTGCAGAGTTCAGCTAGCTTGACGCGGAGGAGGAAGACGCGGCGGAGAAAAGATGTTTCCGGCAGCGACGGTCGCGGAGGCGGTACCTCCACACCGCCTGAAAATGACGAGGTGGCTATGGTTAAATCAGAACCGTTGGTTGGAGTGTTGGAGTTGATCAAGGCGCACGAGCACAGTTCATTGTTCGAGCGCCGTCTTGAAAACCAGCTGGAGTCTGACAGATACAAAGACATAGTGAAACAGCCACTGGACATGGAAACCATACAATTAAGAATCCAGAAAGGTCAGTATTCCTCGTGCATTAGTGCATTCTTCCGCGACCTCCTCCTCCTGTTCACCAACGCCACCGTCATATTCCCCCATGACTCGCCGGAGTCACAGGCGGCGCGGCAGCTGCATCGCCTTGTCACCGCCGAGATGAAGAACCACGCCCAAGCACAATCCGACCCTATCCCCCGGAAGAACGATTCACTCCCTCCAAACGTACCAGTAGCCAAACCAGATTCTCTCTTGTCCAAGAACAAAGCCTCTGGTCCCATATTGGTTTGCCGCAAACGCAGTTCAATGTCAGCGAAACCTTCCTCGACCACTTTTGGGCAAAAGAATAATGAGCAACCCATCTTCAACGACAAGAAGGAAAGGCCAGCTTCTGATTCAAAACCTCCCACGAAACCCTCTTCTTCTGATACAGACGAAGAGGAGCCTCCCAAGGCGAAGGAGAAGCCTGTGACTGGAGCGAGAAGCCTGAGAAGGAGCAACAAGAACCTCAACAATAAGAAACTTTCCTCTAACTCCACTCCTAAGGCGGGATCCTCCGGTAGCAAGCCATCGGAGAGTGTTAAGGCAGAGAAGAGCAAAGCAGAGGGAGGGCCAGAGAAGAAGAGGAGTGCTGCTGCTGATTTCTTGAAACGGATAAAGCGAAATACTTCGGTGGAAGCTGTGAAGGGTGGTGGGGCGGGTGGTGGAGGAGGAGGAAGTAGTAGCAGCAGCAAGGGAGGGGGAGGTGGGGGTGGTGTTAGTGGCAAAGAGCAGAAGAAAATGGTGAATAATGTAAAGGGAGGAGATAAAGGGAAAGAAAGGGCATCAAGGCATAGCGTTGGAGGGGGATCAGGGTCTGCGGATAAAAGAAATAAGAACACTGAGAACAACAGCTCTCAGTCGAAGAGGAGTGTTGGAAGACCTCCAAAGAAAGCAGCAGAGACAAATGCAGGAAGTTCAAAGCGTGGGAGGGAAACTAGTGCAAGTGCTGGCAAAGATAAGCGACCCAAGAAACGTTCCAAGAAATGA 2196 0.5455 MENHQNHKGEAEPDREKNQNHNQAWGTWEELLLAFAVNRHGFKDWDTVAMEVQSRATRLLATARHCEQKFHDLSRRFADQCNDGVTPPQQNGEAAGDNSDHVPWLDELRKLRVAELRREVQRRDDSILSLQLEVKRLEEEKENDGKDDEKPDLAVPGEARPENDKTGGEVEEVGPANSGPERTANADKMLPTTGDESDRENQSVNESNSTGSRFDKTGEGDAKLRVEPDPVQTGSKEADPVARKGKPVGEESNNGSYDALAKVPTCESVPPSDERKVEQDDDSSELHDSVAHSGEGGTRESSEVQSSASLTRRRKTRRRKDVSGSDGRGGGTSTPPENDEVAMVKSEPLVGVLELIKAHEHSSLFERRLENQLESDRYKDIVKQPLDMETIQLRIQKGQYSSCISAFFRDLLLLFTNATVIFPHDSPESQAARQLHRLVTAEMKNHAQAQSDPIPRKNDSLPPNVPVAKPDSLLSKNKASGPILVCRKRSSMSAKPSSTTFGQKNNEQPIFNDKKERPASDSKPPTKPSSSDTDEEEPPKAKEKPVTGARSLRRSNKNLNNKKLSSNSTPKAGSSGSKPSESVKAEKSKAEGGPEKKRSAAADFLKRIKRNTSVEAVKGGGAGGGGGGSSSSSKGGGGGGGVSGKEQKKMVNNVKGGDKGKERASRHSVGGGSGSADKRNKNTENNSSQSKRSVGRPPKKAAETNAGSSKRGRETSASAGKDKRPKKRSKK 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00654 731 MobiDBLite consensus disorder prediction 138 169 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 444 731 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 138 342 - -
Viun1g00654 731 Pfam Bromodomain 352 433 IPR001487 GO:0005515
Viun1g00654 731 MobiDBLite consensus disorder prediction 1 19 - -
Viun1g00654 731 SUPERFAMILY Bromodomain 347 449 IPR036427 GO:0005515
Viun1g00654 731 Pfam Myb-like DNA-binding domain 23 72 IPR001005 -
Viun1g00654 731 ProSiteProfiles Bromodomain profile. 357 429 IPR001487 GO:0005515
Viun1g00654 731 SMART bromo_6 338 448 IPR001487 GO:0005515
Viun1g00654 731 CDD SANT 24 73 IPR001005 -
Viun1g00654 731 MobiDBLite consensus disorder prediction 651 666 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 509 550 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 269 294 - -
Viun1g00654 731 Gene3D - 337 458 IPR036427 GO:0005515
Viun1g00654 731 Coils Coil 120 147 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 582 613 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 1 21 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 675 694 - -
Viun1g00654 731 CDD Bromodomain 352 443 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 491 508 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 216 232 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 80 101 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 551 581 - -
Viun1g00654 731 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 11 731 - -
Viun1g00654 731 MobiDBLite consensus disorder prediction 295 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00654 Viun-Chr1 6239300 6244587 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun1g00654 Bromodomain 1.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00654 - - gmx:100811021 1040.8