Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun1g00654 | ATGGAAAACCACCAAAACCACAAGGGAGAGGCAGAACCTGACAGAGAGAAGAACCAAAACCATAACCAAGCGTGGGGCACGTGGGAGGAGTTGTTGCTAGCGTTCGCTGTGAACCGCCATGGCTTCAAGGACTGGGACACCGTCGCCATGGAGGTTCAGTCGCGCGCCACGCGCCTCCTCGCCACGGCGCGCCACTGTGAGCAGAAATTTCACGATCTCAGCCGCCGATTCGCCGACCAATGCAACGACGGTGTTACGCCGCCGCAACAGAACGGCGAGGCCGCCGGGGACAACTCCGATCACGTCCCGTGGCTGGACGAATTGAGGAAACTCCGCGTCGCCGAGCTCCGCCGCGAGGTCCAGCGGCGCGACGATTCCATTTTGTCGCTGCAGTTGGAGGTGAAGAGACTGGAGGAGGAGAAAGAGAATGACGGTAAAGACGACGAGAAACCAGATCTGGCGGTTCCCGGCGAAGCACGTCCGGAAAACGACAAAACCGGCGGAGAAGTTGAGGAGGTTGGACCGGCGAATTCCGGACCGGAGAGAACCGCGAACGCTGACAAGATGTTGCCAACAACGGGCGACGAATCGGACCGGGAGAATCAGTCAGTTAACGAGTCTAACTCGACCGGTTCGAGGTTTGATAAAACCGGAGAAGGTGACGCAAAGTTAAGAGTCGAACCGGATCCGGTTCAGACCGGTTCAAAAGAAGCGGACCCGGTTGCGAGGAAGGGAAAACCGGTTGGGGAGGAATCAAATAACGGAAGCTACGATGCGTTGGCGAAGGTGCCAACGTGTGAGTCGGTGCCTCCGAGTGACGAGAGGAAGGTGGAGCAGGACGATGACTCGTCTGAGTTGCACGACTCAGTGGCTCACTCCGGGGAGGGAGGGACTAGGGAGAGCAGCGAGGTGCAGAGTTCAGCTAGCTTGACGCGGAGGAGGAAGACGCGGCGGAGAAAAGATGTTTCCGGCAGCGACGGTCGCGGAGGCGGTACCTCCACACCGCCTGAAAATGACGAGGTGGCTATGGTTAAATCAGAACCGTTGGTTGGAGTGTTGGAGTTGATCAAGGCGCACGAGCACAGTTCATTGTTCGAGCGCCGTCTTGAAAACCAGCTGGAGTCTGACAGATACAAAGACATAGTGAAACAGCCACTGGACATGGAAACCATACAATTAAGAATCCAGAAAGGTCAGTATTCCTCGTGCATTAGTGCATTCTTCCGCGACCTCCTCCTCCTGTTCACCAACGCCACCGTCATATTCCCCCATGACTCGCCGGAGTCACAGGCGGCGCGGCAGCTGCATCGCCTTGTCACCGCCGAGATGAAGAACCACGCCCAAGCACAATCCGACCCTATCCCCCGGAAGAACGATTCACTCCCTCCAAACGTACCAGTAGCCAAACCAGATTCTCTCTTGTCCAAGAACAAAGCCTCTGGTCCCATATTGGTTTGCCGCAAACGCAGTTCAATGTCAGCGAAACCTTCCTCGACCACTTTTGGGCAAAAGAATAATGAGCAACCCATCTTCAACGACAAGAAGGAAAGGCCAGCTTCTGATTCAAAACCTCCCACGAAACCCTCTTCTTCTGATACAGACGAAGAGGAGCCTCCCAAGGCGAAGGAGAAGCCTGTGACTGGAGCGAGAAGCCTGAGAAGGAGCAACAAGAACCTCAACAATAAGAAACTTTCCTCTAACTCCACTCCTAAGGCGGGATCCTCCGGTAGCAAGCCATCGGAGAGTGTTAAGGCAGAGAAGAGCAAAGCAGAGGGAGGGCCAGAGAAGAAGAGGAGTGCTGCTGCTGATTTCTTGAAACGGATAAAGCGAAATACTTCGGTGGAAGCTGTGAAGGGTGGTGGGGCGGGTGGTGGAGGAGGAGGAAGTAGTAGCAGCAGCAAGGGAGGGGGAGGTGGGGGTGGTGTTAGTGGCAAAGAGCAGAAGAAAATGGTGAATAATGTAAAGGGAGGAGATAAAGGGAAAGAAAGGGCATCAAGGCATAGCGTTGGAGGGGGATCAGGGTCTGCGGATAAAAGAAATAAGAACACTGAGAACAACAGCTCTCAGTCGAAGAGGAGTGTTGGAAGACCTCCAAAGAAAGCAGCAGAGACAAATGCAGGAAGTTCAAAGCGTGGGAGGGAAACTAGTGCAAGTGCTGGCAAAGATAAGCGACCCAAGAAACGTTCCAAGAAATGA | 2196 | 0.5455 | MENHQNHKGEAEPDREKNQNHNQAWGTWEELLLAFAVNRHGFKDWDTVAMEVQSRATRLLATARHCEQKFHDLSRRFADQCNDGVTPPQQNGEAAGDNSDHVPWLDELRKLRVAELRREVQRRDDSILSLQLEVKRLEEEKENDGKDDEKPDLAVPGEARPENDKTGGEVEEVGPANSGPERTANADKMLPTTGDESDRENQSVNESNSTGSRFDKTGEGDAKLRVEPDPVQTGSKEADPVARKGKPVGEESNNGSYDALAKVPTCESVPPSDERKVEQDDDSSELHDSVAHSGEGGTRESSEVQSSASLTRRRKTRRRKDVSGSDGRGGGTSTPPENDEVAMVKSEPLVGVLELIKAHEHSSLFERRLENQLESDRYKDIVKQPLDMETIQLRIQKGQYSSCISAFFRDLLLLFTNATVIFPHDSPESQAARQLHRLVTAEMKNHAQAQSDPIPRKNDSLPPNVPVAKPDSLLSKNKASGPILVCRKRSSMSAKPSSTTFGQKNNEQPIFNDKKERPASDSKPPTKPSSSDTDEEEPPKAKEKPVTGARSLRRSNKNLNNKKLSSNSTPKAGSSGSKPSESVKAEKSKAEGGPEKKRSAAADFLKRIKRNTSVEAVKGGGAGGGGGGSSSSSKGGGGGGGVSGKEQKKMVNNVKGGDKGKERASRHSVGGGSGSADKRNKNTENNSSQSKRSVGRPPKKAAETNAGSSKRGRETSASAGKDKRPKKRSKK | 731 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 138 | 169 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 444 | 731 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 138 | 342 | - | - | |
Viun1g00654 | 731 | Pfam | Bromodomain | 352 | 433 | IPR001487 | GO:0005515 | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Viun1g00654 | 731 | SUPERFAMILY | Bromodomain | 347 | 449 | IPR036427 | GO:0005515 | |
Viun1g00654 | 731 | Pfam | Myb-like DNA-binding domain | 23 | 72 | IPR001005 | - | |
Viun1g00654 | 731 | ProSiteProfiles | Bromodomain profile. | 357 | 429 | IPR001487 | GO:0005515 | |
Viun1g00654 | 731 | SMART | bromo_6 | 338 | 448 | IPR001487 | GO:0005515 | |
Viun1g00654 | 731 | CDD | SANT | 24 | 73 | IPR001005 | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 651 | 666 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 509 | 550 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 269 | 294 | - | - | |
Viun1g00654 | 731 | Gene3D | - | 337 | 458 | IPR036427 | GO:0005515 | |
Viun1g00654 | 731 | Coils | Coil | 120 | 147 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 582 | 613 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 675 | 694 | - | - | |
Viun1g00654 | 731 | CDD | Bromodomain | 352 | 443 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 491 | 508 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 216 | 232 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 80 | 101 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 551 | 581 | - | - | |
Viun1g00654 | 731 | PANTHER | DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN | 11 | 731 | - | - | |
Viun1g00654 | 731 | MobiDBLite | consensus disorder prediction | 295 | 309 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun1g00654 | Viun-Chr1 | 6239300 | 6244587 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Viun1g00654 | Bromodomain | 1.7e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun1g00654 | - | - | gmx:100811021 | 1040.8 |