Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00568 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAAACAATGTTCTATTTCTGAATCCAGAGTCATCTAGCAGTTTTCAGGCTTCAACATCTGTGAACACAGTTCCTGAATTATGTAGGAGTAGCAGCAGAACATGCACCCACACTCACACTTGCAACCCACCTGGCCCTGATGCTGCTCACACACACACATGCTATCACACTCACACCCAAATTTTTGCACCTGAAGATGATCACCACAAGGAGCACCACCACACCAACTCCAAACCAAAAAGGCCTTCTGGCAACCGAGAAGCAGTTAGAAAGTATAGGGAGAAGAAGAAGGCTCACACTGCATACTTGGAGGAGGAAGTTAAGAAATTGCGTTTGGTGAATCAGCAACTAGCAAGGAAACTACAAGGGCAAGCACTTCTTGAAGCAGAATTGGCAAGGTTGAGGAGCATTTTGGCACACCTCAAGGGGAAAATAGACAGTGAATTGGGTGCTTTCCCCTTTCAAAAGCAGTGTAACTCTTACATTTCCAAAGAAGGGAATGCTGGTTTGCTTTCTACTGCAAGAACAATTGGCCTTGAGTGTCAGAACAACATGACATGCTTCCATCCACATGCAGGATCATCATCACAGGCCAACATTTGTGCATATGGAAAGTCTGTGAGTCCATGGGAAGGAAACTGCCAACCTGAAATTGTAGATTGTGATGTAGATGCAAATAACTTGACCAGTAATGAAGGACAAACTGTGGAGACAGTGGATAACTTCTTGTCATCTGCATCTCAAGAGTGA 786 0.4415 MDDGNAELSDKLSNNVLFLNPESSSSFQASTSVNTVPELCRSSSRTCTHTHTCNPPGPDAAHTHTCYHTHTQIFAPEDDHHKEHHHTNSKPKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRLVNQQLARKLQGQALLEAELARLRSILAHLKGKIDSELGAFPFQKQCNSYISKEGNAGLLSTARTIGLECQNNMTCFHPHAGSSSQANICAYGKSVSPWEGNCQPEIVDCDVDANNLTSNEGQTVETVDNFLSSASQE 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00568 261 CDD bZIP 97 144 - -
Viun1g00568 261 MobiDBLite consensus disorder prediction 79 105 - -
Viun1g00568 261 Gene3D - 85 159 - -
Viun1g00568 261 SUPERFAMILY Leucine zipper domain 92 134 IPR046347 GO:0003700|GO:0006355
Viun1g00568 261 SMART brlzneu 77 152 IPR004827 GO:0003700|GO:0006355
Viun1g00568 261 PANTHER CCAAT/ENHANCER BINDING PROTEIN 16 165 IPR031106 GO:0003700|GO:0006351
Viun1g00568 261 MobiDBLite consensus disorder prediction 79 103 - -
Viun1g00568 261 Pfam Basic region leucine zipper 89 142 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00568 Viun-Chr1 4904978 4906945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00568 44 202 bZIP Transcription Factor Family AT3G51960 49.091 1.58e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun1g00568 bZIP_2 7.8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00568 K25785 - gmx:100527780 367.081