Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00535 ATGGTTCAAAGAAAGGTTCCTGGCAAGCTTGGAATCCAAGCTGAACATGTTAAATCAGACAAGAGGTTGGCAAATATGAAGCTATATTCATCTCAGCACCAAGATGCCAAAACTAGAGGGGCTGATATGAAGAAGAAAATGAGAAAATCAAGGTCAATAAACCTTTCTGATCTTGAGGCTCTTCAATCATCATCATCATCATCAACACCTTCAAGGAGAAGCTTGTCTCAACCAGGAAAGCCACCTCCTCTTCAAACTCCAACCACTGCAGCATCAGCATCAGCATCAGCATCACCTCAGAAGCAGCAACCTTTGTTCAGAACAACAGATGTTTCACCCAATTACATGAAACCAACAAGCAGTTCACATGCAAAAAAGGAACTTTTCCCGGTAAGCCACAGGAACGCTCAATCTGGTTCTGATTTTAAGAATCTTCCACGAAAATTTTCCACTGATTCCAAAGCTGCCTGTGCTAAAAAACCTGCCAAAGCCTTGGCAAGATCGTCTAGTTTGAGTTTGGTGAGAACATTGACAAAAACCACTAGTTTCAAGGCTTCTAGAGCCTGTTCTAGAAAATCCTCCAGGGCTGTTATGTGTGCAGATATGACTGCACCACAGAGAGCCACTTGTTCTTCAACTTTGAAGGACTCAAAGTTCCCTTCGTACCTCATGCTTAGCCCTGGGGCAACCGAGTCAGAGGGAACTTCAGCCATGAAGGTTTGCCCTTACACATATTGTTCCCTTAATGGTCATCATCATGTTGATTTGCCGCCATTGAAGAGCTTCGTGTCAGCAAGGAGGCGCCTTCTGAAGACGCAGAAGCGCGCCAAGCTTGAAGCTCTCAGCCCCCGGAGACTGAAGGTTCCCCTTAAGACAGATAAGAAGGAATCTGATGTTAAGCAGAATGTTTTTGATGAAAAACCTGCTTGTGATGAAATCGGCATTGATATCTTCATTGAAATCTATGCCAATGAAAAGGATGCAAAACCAACCGGAGCAGAAGAAATGGGGAGAAGAGATTTTCTCAAAGAGATTGAGGATCAAGCAGATAACAAGTCTCCGATTGAAGATAATGGCGTAGCAGCAAGAACCATTGGTATTCCTTCTCCCTCTGTACGTGAACTTGATCTTGAGGAGGATTTGCAAAAGCCCTTTGATGACGTTGCAATCGGAGTTGATACCAACGGCAAATTTCTCCAAGAACAATGTTCACAAGATGCAATTGAAGATCACCAACCTACTGTCTGGTGTCATGAAGAAATGAGCATGGGAAGCTACTGCAGCGATGGGGAACAAGACATGGGGGATGTTGACATGGATGATTCTGATTCCAGAACCTATGAAATGGAGTGGAAGGAGGAGAGATTTTGCGGATTCGATCACGAAGAGGATTCTGATTCTTCAGTTTACACAGAAGAGGACAACGACTCAAAAGTTGAGTCCTCATCAGAGAGTTCTCATGATGTGTCAGTCACATGGTTAGATGACATCCTTGGTAGCTACTATGAGGACTTTCTGATTGATGAAACACACAAAGAGGCCAATTCAGAAGAAAGCACCCATTTTGAAGAATCTATTGGCATTAGTTCCGTCCTTGAAGACACGAATGGAAGCATTGAAGCCAAAGAAATTGACCAATCTTCATTTCCAGAGGAAATATTTGAGTATATGATGATTGCAGGAGATAATGGTGGAGAAGATGAGAAACATGTGGATGATGAGGCCAGTTGCAACTCAAAGACACTTGATGAACAGACATTTGACAGCACTCAGAATCAGAAGATGAGTGACACTAGCACAATTGACGAGACAGGGGAAGAGGGATGCTTAAGCAGCCTAGGGAACAATGATGAGAGCAGTAAAATGGAGAGGGAAATTGAGTTGGTGGATGTGTCTGAGGAAAGTAACATGGCGGATCAAGATCAGGATTTGTTGGAAAAAGACCAAGGTAAAGGTAGAAGGTTCCAAAGAACAAGTTGCATAGGTGGTGAAGAGGAAGACGCAAGCAAGAATTGGAAAGGTTCAATTGGGAGAAAGAGGGGTGTTGAAGATGATGATGAGATGAGAAAGTTCAACCCCAAAGAGCCAAATTTCCTGCCTTTGGTTCCTGAACCAGAAAAAGAAAAGGTTGACCTGAGACATCAAATGATGGATGAGAGAAAGAATTCAGAGGAATGGATGCTTGATTGTGCACTCAGACAAGCTGTGACAAAACTTGCACCAGCAAGGAAGAAGAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACGGTGATGCCAGCACCCAAATGTGAAAACCGTGTGAGAAACGATTCAGCATTTGGTCATGCAGGAAGAATTCAAGCTTGTAGCTGA 2352 0.4345 MVQRKVPGKLGIQAEHVKSDKRLANMKLYSSQHQDAKTRGADMKKKMRKSRSINLSDLEALQSSSSSSTPSRRSLSQPGKPPPLQTPTTAASASASASPQKQQPLFRTTDVSPNYMKPTSSSHAKKELFPVSHRNAQSGSDFKNLPRKFSTDSKAACAKKPAKALARSSSLSLVRTLTKTTSFKASRACSRKSSRAVMCADMTAPQRATCSSTLKDSKFPSYLMLSPGATESEGTSAMKVCPYTYCSLNGHHHVDLPPLKSFVSARRRLLKTQKRAKLEALSPRRLKVPLKTDKKESDVKQNVFDEKPACDEIGIDIFIEIYANEKDAKPTGAEEMGRRDFLKEIEDQADNKSPIEDNGVAARTIGIPSPSVRELDLEEDLQKPFDDVAIGVDTNGKFLQEQCSQDAIEDHQPTVWCHEEMSMGSYCSDGEQDMGDVDMDDSDSRTYEMEWKEERFCGFDHEEDSDSSVYTEEDNDSKVESSSESSHDVSVTWLDDILGSYYEDFLIDETHKEANSEESTHFEESIGISSVLEDTNGSIEAKEIDQSSFPEEIFEYMMIAGDNGGEDEKHVDDEASCNSKTLDEQTFDSTQNQKMSDTSTIDETGEEGCLSSLGNNDESSKMEREIELVDVSEESNMADQDQDLLEKDQGKGRRFQRTSCIGGEEEDASKNWKGSIGRKRGVEDDDEMRKFNPKEPNFLPLVPEPEKEKVDLRHQMMDERKNSEEWMLDCALRQAVTKLAPARKKKVALLVEAFETVMPAPKCENRVRNDSAFGHAGRIQACS 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00535 783 MobiDBLite consensus disorder prediction 37 53 - -
Viun1g00535 783 MobiDBLite consensus disorder prediction 55 75 - -
Viun1g00535 783 MobiDBLite consensus disorder prediction 661 693 - -
Viun1g00535 783 MobiDBLite consensus disorder prediction 585 617 - -
Viun1g00535 783 MobiDBLite consensus disorder prediction 462 486 - -
Viun1g00535 783 MobiDBLite consensus disorder prediction 585 623 - -
Viun1g00535 783 Pfam Plant calmodulin-binding domain 654 759 IPR012417 GO:0005516
Viun1g00535 783 MobiDBLite consensus disorder prediction 462 483 - -
Viun1g00535 783 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 759 IPR044681 GO:0005516
Viun1g00535 783 MobiDBLite consensus disorder prediction 23 130 - -
Viun1g00535 783 MobiDBLite consensus disorder prediction 661 702 - -
Viun1g00535 783 SMART CaM_binding_2 647 759 IPR012417 GO:0005516
Viun1g00535 783 MobiDBLite consensus disorder prediction 86 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00535 Viun-Chr1 4526667 4529885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00535 655 783 Calmodulin-binding Proteins AT2G38800 48.837 9.58e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00535 - - gmx:102660315 1104.74