Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00527 ATGGCAGCAGAGTGTATTAGTGGGGCATTTCTCGCCGCTGTCTTTCAAGTGACTTTTGACAAGTTGGCTTCAAGGGACATAGAAGACTACTTCCATAGAAGGAAAATCAAGGATAAGATGCTCAAAAAGCTAGAGATTGTGTTGAATTCCATCAACCAAGTGCTGGAGGATGCAGAGGAAAGACAGTACAAGAGCCCAAATGTGATGAACTGGCTTAATCAGCTGAAAGAGGCTATGTATGAAGCAGAATTGTTGATAGATGAGGTTGCTAATGAGGCGTCAAGACATAAGCTGGAAGCTGAATTTCAGCCTACAACTAGCAAGGTGCGAGGCTTCTTTAAGGCTTTTGTTAATCCATTTGACATACAAATTGCATCTAGGGTTGAAGAACTACTAGAGAACATACAGTTTCTTGCAAGCCAAAAGGATATGCTAGGATTAAGAAAGGGAATTTTTGCTGGCAATGAAGTTGGAGTCAGTTGGAAACAATCCCAGCAATTGCCGACTACATCCTTGGTGGATGAATCTAACATTTGTGGTAGAGAGGAAGAAAAAGAGGAAATCATAAAAATTTTACTTTCTGACAATGTCACATGCAATCAAGTGCCCATAATTAGTATAGTAGGAATGGGAGGGATGGGTAAGACCACCCTTACGCAGCTTGTGTATAATGACCAAAGGGTACTAGATCAATTTGACCTTAAAGCGTGGGTCTATGTTTCACAAGATTTTGATGTTGTTGCTGTCACAAGAGCAATTCTTAAGGCACTTGGGTCCAAAGCAGCAGAAGAAAAAGACTTAAACCTACTTCAACTTCAATTGAAGCAGAGACTGATGGGAAAAAGATTTTTGCTTGTTCTAGATGATGTTTGGAACGAAGACTATGCAAGTTGGGGGGTACTGCAGATCCCCTTCATTTATGGACCTTCAGGAAGTAGGATTATTAGCACCACTCGTAATGAGAAGGTAGCACTGATCATGAACTCCTCCCATCTATATCATTTGAAGCCATTGGAGAAAGAAGATTGTTGGAAGCTATTTTCAGATATTGCATTTCATGACAAGGATGCCACTAAATATCCATATCTTGTTTCAATTGGCAGTAAAATTGTTGATAAGTGTGGAGGATTGCCTTTAGCTTTAAAAGCATTGGGAAATATCTTGCGAGTGAAATTCTCCCAGCATGAATGGGTTAAGATATTGGAGAGTGATATGTGGCACCTATCTGACAATGAAGCCAACATTAACCCTGCTCTTAGATTGAGTTACCACAATCTTCCTTCCTATTTGAAGCGTTGTTTTGCTCATTGCTCCATATTTCCAAAGGGTTATGAGTTTGACAGGGATCAGTTAATCCAACTGTGGATGGCAGAAGGTTTGTTGAGTTGCTGCCAAATAAATATGAGTGAAGAAGAGTTAGGCACTGAGTTCTTCAATGATCTGGTAGCAAGGTCATTTTTCCAACAATCAAGACACCGTGCTTCGTGCTTCACTATGCATGATCTTCTTAATGATTTAGCAATATCTGTCTCAGGAGAATTTTGTTCACAAATAAGTGACAGTTTGGAGATAAATATAACCAAGAGAACACGCCACATTTCATGGTCTCGCAAAATTAACATTGATGATAAATTCTTGGAGCATGTTAGTAAGTGTAACAAATTACGTTGTTTTGTGGCATTCAGATGGGAATTTGGCAGAGGAGGCTTGATCAACACTGATAAACAACGTGATCTGTTCTCTACATTGAAATATTTACGTGTGCTATCCTTCAATGATTGTCTTCTCACTGAGTTAGTTGATGATATAGGCAATTTAAAGCTTTTGCGTTATTTAGACCTTTCGTACACTAAGATTAAAACATTGCCTGATTCCATTTGTAGGCTGCATAATTTGCAGACACTGTTACTATTATGGTGCTATCATTTGGTTGAGCTTCCCATAGATTTGCACAAACTTGTCAACTTGCGCCATCTTGATATACGTATGAGTGGAATAAACAAGATGCCAAACCATATAGGAAGGCTGAAACATCTTCGAACACTGACTAGTTTTTCTATCGGGAAGCATGATGTTAAGGAATTGGGAAATCTCAGCAATCTTCAAGGAACACTTTCAATTTTTCGGTTAGAAAATGTCACTAATCCTCGGGATGCCGTGGAAGCTAATCTGAAAGGTAAAAAGCATTTAGACGGTTTAGTGTTGAATTGGGGTGACAAATTTGGAAGGTGCAATGAAAATGAGGACTCAATATTAGAAAGACAAGTGTTGGAGGCTCTTCAACCAAATGGGTACTTGAAAAAGCTTTCTGTTTTACGTTATGATGGAACTAGCTTTCCAAGATGGTTTGGTGCATCTCATTTGCCCAATTTAGTGTCCATTGCACTGACTAAAAGCAAATTCTGCTTTGTCTTGCCACCATTTGGGCAACTTCCCTCTTTGAAGGAGCTTTCCATATCATGTTTTTATGGAATAGAGGTCATTGGTCCTGAGTTCTGTGGTAGTGATTCCTCCAATATTCCTTTCAGATCTCTTGAAATATTGAAATTTGAGGAAATGAGTGCATGGAAAGAATGGTGCAGTTTGGAAGGTCACAATGAAGAAGGCCAAGGTTTGTCATGTCTCAAAGAGCTTTCTGTGAGACGTTGCCCATGGTTGAGAAGCGCCCTACCTCAACACCTTCCTTCTCTGCAGAAATTGGAAATTTGTGATTGCCAACACTTAGAGGATTCAGTTCCCAAGGCTGCAAGTATTCATGAGATAAAGTTGCGTTTGTGTGAAAAACTTTTCTTGAAAGATTTGCCATCCAGCTTGAAAAAGGCCACAATGCATGGAACTTGCATCATTGAGTCCACCCTCCACCAAATTCTTGTCAACAATCCCTTCCTTGAAGAGATGAAAATCCACAATTTTCATGGTCCAAATAAAAAATGGTCCTCTTTGGATTTGCACATACATGATTCTCTTGTCACTCTCTCTATAACAAGCTGGTACTCTTCCTCTTTGCCCTTTCCACTACACTTGTTTTCCAATCTTCATTCTCTACTTTTTCATGATTGTCCACATCTTGAGTCATTTCCGGAGGGGGGTTTGCCTTCAAGCCTACGCAAACTCGAAATTGAGCGTTGTCCCAAACTGGTTGCTTCTAGGGAGAAGTGGGGATTGTTCAAACTCCATTCTCTGACAGAATTAAGAATTAGTGATGACTTTGAAAACGTGGAGTCTTTCCCAGAGGATATGTTGCTACCACCCACTCTCAGTGTGCTCTACTTAATTGCATGTTCAAAGCTAAAAAAAACAAACTATAGGGGTTTTCTTCATCTGAAATCTCTCAACTCCTTGTATATTCTCTATTGCCCTCTTCTTCAATCTTTGCCAGAAGCAGCTTTATCCAACTCTCTTTCTGTTCTCTACATTCATGAATGCCCTTTACTGAAGCAGCGTTACCAAAGGGATGGAAAGCATTGGCATAAAATTCACAACATCCCTTCTGTGATTATGTCTTAG 3507 0.3972 MAAECISGAFLAAVFQVTFDKLASRDIEDYFHRRKIKDKMLKKLEIVLNSINQVLEDAEERQYKSPNVMNWLNQLKEAMYEAELLIDEVANEASRHKLEAEFQPTTSKVRGFFKAFVNPFDIQIASRVEELLENIQFLASQKDMLGLRKGIFAGNEVGVSWKQSQQLPTTSLVDESNICGREEEKEEIIKILLSDNVTCNQVPIISIVGMGGMGKTTLTQLVYNDQRVLDQFDLKAWVYVSQDFDVVAVTRAILKALGSKAAEEKDLNLLQLQLKQRLMGKRFLLVLDDVWNEDYASWGVLQIPFIYGPSGSRIISTTRNEKVALIMNSSHLYHLKPLEKEDCWKLFSDIAFHDKDATKYPYLVSIGSKIVDKCGGLPLALKALGNILRVKFSQHEWVKILESDMWHLSDNEANINPALRLSYHNLPSYLKRCFAHCSIFPKGYEFDRDQLIQLWMAEGLLSCCQINMSEEELGTEFFNDLVARSFFQQSRHRASCFTMHDLLNDLAISVSGEFCSQISDSLEINITKRTRHISWSRKINIDDKFLEHVSKCNKLRCFVAFRWEFGRGGLINTDKQRDLFSTLKYLRVLSFNDCLLTELVDDIGNLKLLRYLDLSYTKIKTLPDSICRLHNLQTLLLLWCYHLVELPIDLHKLVNLRHLDIRMSGINKMPNHIGRLKHLRTLTSFSIGKHDVKELGNLSNLQGTLSIFRLENVTNPRDAVEANLKGKKHLDGLVLNWGDKFGRCNENEDSILERQVLEALQPNGYLKKLSVLRYDGTSFPRWFGASHLPNLVSIALTKSKFCFVLPPFGQLPSLKELSISCFYGIEVIGPEFCGSDSSNIPFRSLEILKFEEMSAWKEWCSLEGHNEEGQGLSCLKELSVRRCPWLRSALPQHLPSLQKLEICDCQHLEDSVPKAASIHEIKLRLCEKLFLKDLPSSLKKATMHGTCIIESTLHQILVNNPFLEEMKIHNFHGPNKKWSSLDLHIHDSLVTLSITSWYSSSLPFPLHLFSNLHSLLFHDCPHLESFPEGGLPSSLRKLEIERCPKLVASREKWGLFKLHSLTELRISDDFENVESFPEDMLLPPTLSVLYLIACSKLKKTNYRGFLHLKSLNSLYILYCPLLQSLPEAALSNSLSVLYIHECPLLKQRYQRDGKHWHKIHNIPSVIMS 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00527 1168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 437 IPR027417 -
Viun1g00527 1168 FunFam Probable disease resistance protein At1g63360 423 509 - -
Viun1g00527 1168 SUPERFAMILY L domain-like 498 912 - -
Viun1g00527 1168 Coils Coil 41 61 - -
Viun1g00527 1168 PANTHER DISEASE RESISTANCE PROTEIN RP 56 914 IPR044974 GO:0006952
Viun1g00527 1168 Pfam NB-ARC domain 181 433 IPR002182 GO:0043531
Viun1g00527 1168 Coils Coil 72 92 - -
Viun1g00527 1168 Gene3D - 429 508 IPR036388 -
Viun1g00527 1168 Gene3D - 160 332 IPR027417 -
Viun1g00527 1168 Pfam Rx N-terminal domain 10 102 IPR041118 -
Viun1g00527 1168 Gene3D Ribonuclease Inhibitor 543 944 IPR032675 -
Viun1g00527 1168 PRINTS Disease resistance protein signature 204 219 - -
Viun1g00527 1168 PRINTS Disease resistance protein signature 277 291 - -
Viun1g00527 1168 PRINTS Disease resistance protein signature 892 908 - -
Viun1g00527 1168 PRINTS Disease resistance protein signature 374 388 - -
Viun1g00527 1168 Gene3D - 337 427 IPR042197 -
Viun1g00527 1168 SUPERFAMILY RNI-like 930 1152 - -
Viun1g00527 1168 FunFam Probable disease resistance protein At1g61300 161 331 - -
Viun1g00527 1168 Gene3D Ribonuclease Inhibitor 977 1164 IPR032675 -
Viun1g00527 1168 Gene3D - 15 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00527 Viun-Chr1 4414421 4420338 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00527 586 682 WRKY Transcription Factor Family AT4G12020 33.673 4.14e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00527 - - vra:106759943 1964.5