Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00468 ATGCCAGATGTTCAAGCCCTTGTTAATGAATTTGTCAATCTGCTCAAGAAGCGTAAAATTGAAGGGTCTCAGGCCACAGCGAAGCAGACAGCAGAGTTGCTCCGGTCAGTGATTTCGCATCAGCGGGTGTCACACACAAACCAGGCCACATCTCTGATAAATGCAATAAGGACTGTGGGGGAGAAGATTATTGATGCTAATCCTATTGAGTTATCTGTGGGAAATATTGTGAGGCGTGTTCTTCACATTATAAGGGAGGAGGATCTTTCCCTTGTTACAGATGCTTTGGCTGGGTTTGGAAGTGATGATGAAGATGATGTGGAGCGAGATGATCATCCTGCTTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCCTCATTACAAACTCTTCTAGAGGATGTGACTGATTCAGCTGCCGTTCCAGCAACTCCTTCCTCGACGGGTGACTCTGATGGGAAAAGTAGATCTGTTGAAAAGGGTACAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTCAATGAACTTATTCAAGACATAACCTCTTGCCATGAACAAATAGCAGAACAAGCAGTAGAGCATATTCATCAAAATGAGGTAATATTGACGCTAGGCAGTTCAAAAACAGTGTTCGAATTTCTTTGTGCTGCAAAGGAGAAAAAAAGATCATTTAAGGTTTTTGTTGCTGAAGGTGCCCCGAGGTATCGGGGACATCTCCTTGCAAAAGAATTGGCTGCTAGAGGCTTACAGACCACAGTCATTGCTGATTCTGCAAGTTTTGCTATGATTTCCAGGGTGAATATGGTTATAGTTGGTGCTCATGCCGTCATGGCTAATGGTGGAGTAATTGCCCCAATTGGGTTGCATATGGTTGCACTTGCAGCTCGTAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGGAGTCATAAGTTGTGCCCTTTGTATCCTCACAATCCTCATGTCCTACTGAATGAATTGAGATCCCCATCCGAACTACTAGACTTTGGAGAATTCTCAGATTTGATGGATTCTGCAACTGGTGTTGGTTCTCTTCATGTTGTTAATCCAGCATTTGATTATGTGCCACCAGACCTTGTTAGTCTCTTCATTACTGGCACTGGAGGGCATAACCCATCATATATGTACCGGCTGATAGCTGATTATTACTCTGCCGCTGATTTGGTGGTGAAACAGAGACCTACTACAGGGAATTGA 1236 0.4442 MPDVQALVNEFVNLLKKRKIEGSQATAKQTAELLRSVISHQRVSHTNQATSLINAIRTVGEKIIDANPIELSVGNIVRRVLHIIREEDLSLVTDALAGFGSDDEDDVERDDHPALSAAAVAAAARSTLRPPSLQTLLEDVTDSAAVPATPSSTGDSDGKSRSVEKGTRGRKLKHDVIEAVNELIQDITSCHEQIAEQAVEHIHQNEVILTLGSSKTVFEFLCAAKEKKRSFKVFVAEGAPRYRGHLLAKELAARGLQTTVIADSASFAMISRVNMVIVGAHAVMANGGVIAPIGLHMVALAARRHAVPFVVLAGSHKLCPLYPHNPHVLLNELRSPSELLDFGEFSDLMDSATGVGSLHVVNPAFDYVPPDLVSLFITGTGGHNPSYMYRLIADYYSAADLVVKQRPTTGN 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00468 411 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 402 - -
Viun1g00468 411 Gene3D - 190 395 IPR042529 -
Viun1g00468 411 FunFam translation initiation factor eIF-2B subunit beta 190 396 - -
Viun1g00468 411 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 400 IPR037171 -
Viun1g00468 411 MobiDBLite consensus disorder prediction 144 170 - -
Viun1g00468 411 Pfam Initiation factor 2 subunit family 19 385 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00468 Viun-Chr1 3763822 3771523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00468 1 403 Eukaryotic Initiation Factors Gene Family AT3G07300 76.039 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00468 K03754 - gmx:100807877 704.131