Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00444 ATGGAAGTAATTGCTCAGATAGTCTTACAAAACTTGAGCTCTTTTGCTCAAGAGGAGTTTGGAATCATTTGGAATCTCAAAGATGACGTACAGCAAATGAAGAGCACAGTATCTGCAATAAAAGCTGTACTCCTGGATGCAGAGGCAAAGACCAACAACCTTCAAATCAGTAATTGGTTGGAGGAGCTGAAAGATGTGCTTTACGATGCAGATGACTTGCTCAATGATATTTCCTCTGAAGCGATGAAAAGAAAAGTGATAGGTTCTAGCACAGTCTTGAGAAAGATACAGATTTTCTTCTCCCAAGAAAACCAAATTGCCTATAGTTTTAAATTAGGTCATCAAATGAAAGCAATCCAGAAGAGGCTAGATGCAATTGCTAAAAACAAGATTACTTTGCAATTGACAGACCGTCCTTTGGAGACTCCAATTGCATATAGGGAGCAGAGACAAACTTACTCTTTTGTGAGAGAAGATGATGTCATTGGGAGAGAGGAGGAAAAGAAACTTCTTAAAAGTTATTTGCTAGACACCAAAGTGAGTGTGATAGACAATGTGTCTGTACTTGCCATAGTTGGGTTTGGAGGACTAGGTAAGACTGCCCTTGCTCAACTTGTTTTTAACGACAATGCTGTCCAGTGCTATTTTGAGCAAAAAATGTGGGTGTGTGTCTCAGATGAATTTGACATGAGGAAAATAGCTGAAAAGATGATTGGGAATGATAAGAATAGTGAGATTGAGCAGCTGCAGCAAGATCTCAGAAACAAAGTTCGTGGAAAAAAGTTTTTGCTTGTGCTGGATGACGTGTGGAATGAGGATAGGGAACTGTGGCTTAAATTGAAGAGCTTAGTTGTGGAAGGAGGTAAGGGGAGTGCCATAATTGTAACAACACGTAGTAGGACCGTGGCGAAAATAATGGCCACACATCCACCCCTTTTCTTGAAAGGTCTTGATTTAGAAAGATCTTGGAAGCTATTCTCTCGAGTGGCTTTTGATGAGGGGAAAGAACCAAATGATTTGGAGTTGTTAGCCATGGGAAGGGATATTGTTCAAAAATGTGCTGGGGTTCCCCTGGCCATAAGAACTATTGGCAGCCTCTTGTACTCTCGAAACTTGGGCCGGAGTGATTGGCTATATTTTAGTGAAGTTGAGTTTTCAAAGATAGATCAACACAAGGACAAAATCTTTGCAATCCTTAAACTGAGTTATGATCATCTTCCTTCATTTTTGAAAAAGTGTTTTGCGTATTGTTCATTGTTTCCAAAAGATTTTGAGTTTGACAAGAAAACACTCATTCAGTTATGGGTGGCTGAGGGGTTCATTCAATCATCACGTGACAATAGATGTGAAGAAGATGTTGGTCATGAGTACTTCATGAATTTGCTGTCAATGTCACTTTTCCAAGATGTGACTTTAGATGATTTTGGTGACATTCTTACTTGTAAAATGCATGACCTGGTACATGATCTCGCACAACTAGTGGTTGGAAAAGAATACGCCTTTGTTGAAGGAAAAAAAGAGGACATTCGAAACAGAACACGTTATTTGTCTTCTTGTACTTCATTACATTTTTTAGAGAAAACATCATCATTTTCCAACAAGTTAAGGACATTTATTTTTATTGGAGAGCCACTTTATGGAAGTCAAAATTTCGGTCCTCCGCCAAGTCTTCATTTTCCTTTTCTCTTAAGCATGAAGTGCCTACGGGTGTTAACACTCTCTGGGTTGCATTTGATAACAATTCCAAATAGTATTCGAGAGTTGAAGCAATTGAGATATCTTGATCTTTCAATGAATAAGTTTCTGGTAAGTCTTCCACTAGATGTTACTAGCCTACATAACTTGCAGACTTTAAAACTTTCTCGATGTGGCGAACTTAAAGAATTACCCTCAGATATCAGCAGAAGTCTTAGGCATCTTGAATTGAATGATTGTGGGAAATTGACATGTATGCCATGTGGGTTGGGACAATTGACCAATCTTCAAACACTGACACATTTTTTATTGGACTCTAAAAGTAAAAACGTTGATATAAGTGAATTGAGTGGGCTAAACAACCTTAGAGGGAAATTAGTAATTAAATGGTTGGATTCTCTGCGAGAAAATGCTGCAGTGGTTGAGTCTGCAAACATATTACTGGAGAAGCAACATCTTCAAGAATTGGAATTACGGTGGCGGCTCGGTGTGAATTCATTGTGGAGGGATCCTATTGAGGAGAGGCTAAAGATGGAAAATGAAAAGATCTATATAGATGAGCCATTGCTGAAGAAAGATGAAAAGATAATGCAAGGCCTGCAGCCACATCATTCAATAAAAAGACTAGTAATAGATGGATATTGTGGCAAAAGTTTACCAGACTGGATAGGGAATCTGTCATCACTCTTGAGTCTTGAAATCAGTAATTGCAATGGTTTGAAATCACTGCCTGATGGAATTCGGGACCTTGTGTCTTTACAACGACTCTGCATATATAATTGCTCACTGCTAGAAAAAAGATGTGCTAGAGGAAATGGTGTAGAATGGTCGAAAATCGCTCATATCCCAAAAGTTCTTGTCTCTGCCTTTACACCAACTGATCTCAGGTATATTAATTGA 2595 0.3869 MEVIAQIVLQNLSSFAQEEFGIIWNLKDDVQQMKSTVSAIKAVLLDAEAKTNNLQISNWLEELKDVLYDADDLLNDISSEAMKRKVIGSSTVLRKIQIFFSQENQIAYSFKLGHQMKAIQKRLDAIAKNKITLQLTDRPLETPIAYREQRQTYSFVREDDVIGREEEKKLLKSYLLDTKVSVIDNVSVLAIVGFGGLGKTALAQLVFNDNAVQCYFEQKMWVCVSDEFDMRKIAEKMIGNDKNSEIEQLQQDLRNKVRGKKFLLVLDDVWNEDRELWLKLKSLVVEGGKGSAIIVTTRSRTVAKIMATHPPLFLKGLDLERSWKLFSRVAFDEGKEPNDLELLAMGRDIVQKCAGVPLAIRTIGSLLYSRNLGRSDWLYFSEVEFSKIDQHKDKIFAILKLSYDHLPSFLKKCFAYCSLFPKDFEFDKKTLIQLWVAEGFIQSSRDNRCEEDVGHEYFMNLLSMSLFQDVTLDDFGDILTCKMHDLVHDLAQLVVGKEYAFVEGKKEDIRNRTRYLSSCTSLHFLEKTSSFSNKLRTFIFIGEPLYGSQNFGPPPSLHFPFLLSMKCLRVLTLSGLHLITIPNSIRELKQLRYLDLSMNKFLVSLPLDVTSLHNLQTLKLSRCGELKELPSDISRSLRHLELNDCGKLTCMPCGLGQLTNLQTLTHFLLDSKSKNVDISELSGLNNLRGKLVIKWLDSLRENAAVVESANILLEKQHLQELELRWRLGVNSLWRDPIEERLKMENEKIYIDEPLLKKDEKIMQGLQPHHSIKRLVIDGYCGKSLPDWIGNLSSLLSLEISNCNGLKSLPDGIRDLVSLQRLCIYNCSLLEKRCARGNGVEWSKIAHIPKVLVSAFTPTDLRYIN 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00444 864 Gene3D - 403 493 IPR036388 -
Viun1g00444 864 Coils Coil 696 716 - -
Viun1g00444 864 Gene3D - 317 402 IPR042197 -
Viun1g00444 864 PANTHER DISEASE RESISTANCE PROTEIN RP 55 823 IPR044974 GO:0006952
Viun1g00444 864 PRINTS Disease resistance protein signature 586 602 - -
Viun1g00444 864 PRINTS Disease resistance protein signature 188 203 - -
Viun1g00444 864 PRINTS Disease resistance protein signature 256 270 - -
Viun1g00444 864 PRINTS Disease resistance protein signature 353 367 - -
Viun1g00444 864 Pfam Rx N-terminal domain 6 91 IPR041118 -
Viun1g00444 864 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 417 IPR027417 -
Viun1g00444 864 SUPERFAMILY L domain-like 482 828 - -
Viun1g00444 864 Pfam NB-ARC domain 185 404 IPR002182 GO:0043531
Viun1g00444 864 FunFam Probable disease resistance protein At1g63360 403 493 - -
Viun1g00444 864 Gene3D - 146 310 IPR027417 -
Viun1g00444 864 FunFam Probable disease resistance protein At1g61300 145 311 - -
Viun1g00444 864 Gene3D - 5 125 - -
Viun1g00444 864 Gene3D Ribonuclease Inhibitor 555 850 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00444 Viun-Chr1 3498833 3502335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00444 185 540 WRKY Transcription Factor Family AT5G45050 23.404 3.06e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00444 - - gmx:100781872 1271.91