Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00442 ATGGCAAAAAAATTTGATATGATCAAGGATATTGATGGAAAAAGGGAGACGTTGAAACTTGCTGTTAGAATCGTAGATTTGTGGTATGTTGAGTCCTGGGAATCCAAACGAAGTATGGAAATGGTTCTGATGGATCAAAAGGGTGATGTTATTGTTGCAATGATTAAGAAGGAAGATATGGGTGTTTGGGAAGAGAAGCTAAAAGAGGGTGAAAGTTACATAATGCATAACTTTAAACTCTTGAAGAACAGAGCTCAATATAGAGTTTGTGAGCATCCATTTAAGCTGTTGTTTATAGGAGCAACGTCTATACGAGCACAACCCATTGCAAGCATACCTAGAAAGCTCTGGAAGTTCAAAAGTATAAAGGATATCATTGATGGAAAGTATTGTTCTGATTTGTTGGTTGATGTCATTGGTATGGTGGACAATGTAGAGGAGAAAGGCCATTCGAAAAATGTTGTCTTTGACCTGAAAGATTTGAGTGGTGCTATAATCTGTTGCACATTGTGGGATTCGTATTGTGAGAAATTATTGACCTATTGGAGGACATGTAGTCAAACATCTAATGTTGCTATTATTCTTACTCAGGCTAAGATAAAGCCTGCTTCAGGTCCATGGCCAGTTTCACTGTCTAATTCTTGGAATGGTTCGAAACTGATCATAGGCGATGACATACCTGAGCTGATCAATTTTAAGAAGCAATTCGCAGAAACCTGTGGCAGTGAAACTTTTGAGGAAGGGAGTCAATATAGTGGCTCTTCACAGATTAATCATGTTGATAGGTTTATGTATAAAACCGTTGTTAAAAGTGTTTCAGAGATTATGACTGTATTAGAGGAGATTTCCTGTGTTACTGTTGCACGTACACTTAAATTTAACTTGGGAAATGATGGATGGAATTATCTGGTGTGTAACTTTTGTGGGAAAAGAACTCACGAAGTTGGTTCCTTTAAGTGTCTTAGTTGTGATGCCTTTAATGATTCTCCAAGAATCCGGTATAAGCTGGAAATTCAAGTGACTGATGGGAAAAAGGTGGGCAATTTCATGCTTTGGGACCAAGATTGCATGAATTTAATTGGTGTTTCTGCTGCTGATTTGAGAAAGAAAATGATCAAGCATGGTGAAGACGATCCAAAGTGTTTTCCAGAGGATCTAGATGTTATTTTAGGATGTATTTTTGCTTTTAAGGTTAAGCTTCAAGGAAAGAACCGACCTGCCTCAGTTATGAGAGTTTCTACTGACGTGGAAATTATTGATCACGTCAAAGCACTACTGGGACAGGAGGAGGCAAGCTTTGTTGGTGAATGTATTGTTAGCTGTCCATCTGATATAGTTCCTGATACTTCCAATTCCTCACCAATGGTTATTGGTAAATGTAGCAATGCCAGTCTTCTTGATGTACCAACTTCTAGCGGGACTTCTTTAGCAATTGAACTTGCTGAATGTATTGGTAATGCTGCATGTGACTTAACAGCTGATACGGATAGTTCATTGATGTGCCTTTCTTCCACCGCTGATGATGAACCTGATATAGTTTTGTGTATGACGCCCTCTAAAGATGTTTCTGCTCGTATTGATGATCTTCCAGACATTCCATCAAGTATCATGGAGTTTGATTTTCTGGAAGATATTCCTCTAGCTCAGTTATCAGCTACAAAGACTACAAAGCCAACGAAGAGTATCAAAAAGGAGAAATTATAA 1704 0.3826 MAKKFDMIKDIDGKRETLKLAVRIVDLWYVESWESKRSMEMVLMDQKGDVIVAMIKKEDMGVWEEKLKEGESYIMHNFKLLKNRAQYRVCEHPFKLLFIGATSIRAQPIASIPRKLWKFKSIKDIIDGKYCSDLLVDVIGMVDNVEEKGHSKNVVFDLKDLSGAIICCTLWDSYCEKLLTYWRTCSQTSNVAIILTQAKIKPASGPWPVSLSNSWNGSKLIIGDDIPELINFKKQFAETCGSETFEEGSQYSGSSQINHVDRFMYKTVVKSVSEIMTVLEEISCVTVARTLKFNLGNDGWNYLVCNFCGKRTHEVGSFKCLSCDAFNDSPRIRYKLEIQVTDGKKVGNFMLWDQDCMNLIGVSAADLRKKMIKHGEDDPKCFPEDLDVILGCIFAFKVKLQGKNRPASVMRVSTDVEIIDHVKALLGQEEASFVGECIVSCPSDIVPDTSNSSPMVIGKCSNASLLDVPTSSGTSLAIELAECIGNAACDLTADTDSSLMCLSSTADDEPDIVLCMTPSKDVSARIDDLPDIPSSIMEFDFLEDIPLAQLSATKTTKPTKSIKKEKL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00442 567 SUPERFAMILY Nucleic acid-binding proteins 118 236 IPR012340 -
Viun1g00442 567 SUPERFAMILY Nucleic acid-binding proteins 282 404 IPR012340 -
Viun1g00442 567 Gene3D - 249 428 IPR012340 -
Viun1g00442 567 Gene3D - 111 248 IPR012340 -
Viun1g00442 567 Gene3D - 3 106 IPR012340 -
Viun1g00442 567 Pfam Domain of unknown function DUF223 40 124 IPR003871 -
Viun1g00442 567 CDD RPA1_DBD_B_like 137 236 - -
Viun1g00442 567 SUPERFAMILY Nucleic acid-binding proteins 5 105 IPR012340 -
Viun1g00442 567 CDD RPA1_DBD_A_like 19 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00442 Viun-Chr1 3430594 3434739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00442 70 401 Core DNA Replication Machinery Family AT4G19130 21.307 6.56e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00442 - - vun:114165474 947.192