Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00441 ATGGATTCCCATTACGCAGAAGAGGAAAAGGCATGCATCTCTGCAATGAAGCATTGCTTTGGTCCAATATATTGTGCAGTTTTGAATGCAGCAATTGAGCTAAACTTGTTTGAGATGATAGAAAAGGCATCTCCAACATCAGTTGGTGTGACAGCATCTGATGTTGCCTCTCAACTTCCGACACAACACCCAGAATTGGGTCGCAGGATTGATCGCATGCTGTCTCTGCTTGCATCTCACTCTCTTCTCACTTGTTCCACTCGCACAAACCAAGATGGTGAGACTCAAAGATTCTACCACCTTTCTCATCTTGGGTGA 318 0.4465 MDSHYAEEEKACISAMKHCFGPIYCAVLNAAIELNLFEMIEKASPTSVGVTASDVASQLPTQHPELGRRIDRMLSLLASHSLLTCSTRTNQDGETQRFYHLSHLG 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00441 105 Pfam Dimerisation domain 27 78 IPR012967 GO:0046983
Viun1g00441 105 SUPERFAMILY "Winged helix" DNA-binding domain 7 104 IPR036390 -
Viun1g00441 105 FunFam Caffeic acid 3-O-methyltransferase 1 105 - -
Viun1g00441 105 Gene3D - 1 105 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00441 Viun-Chr1 3427952 3430488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00441 8 101 Monolignol Biosynthesis Gene Families AT5G54160 36.842 6.65e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00441 - - vun:114182114 214.927