Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00431 ATGGAGGAGAAATCAGAGAAGCAAGATGATAGTCACCCATCTCTCTTTCTCCCTGATCACGCCACCATCAAAGAAGACAATTCTCCCAGAAAAGTCATTGTTGGTGGCGGTGACAGGTTGAAGAGAGATGAGTGGAGTGAAGGGGCTGTGTCAACCCTTCTTGAAGCCTATGAGGCTAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAAGATGTTGCAAAACATGTCTCATCAAGAGCCAACTCCACCAAGTCACCGAAGACACAGACTCAGTGCAAGAACAAGATTGAGTCCATGAAGAAAAGGTACAGATCAGAGTCTGCAACCACTGCTGATGCATCATCTTGGCCTTTGTACTCTCGCCTTGATCTTCTCCTGCGTGGCACAGGACCAATATCTTCATTCCCAACACCAAATCCAACACCAACAACACCAACACTAACACCAACAACAATAGCACCATCATTTCAACCACCACATGCTGCCACCAACAGTAACCAGGCTCTGGTATTGTTAGATCCTCCTTCACTGGCTGTGTCACAAGCTCCTCCTTCTGCTGCTCCTCCACCACCCACACAAAACTCTCACGGATCCAATGGTGACGAAAGACTAATCAAGGAAGATGGGTTAGGGGGGAAGTCATGTGAGGATGTATCTGAGAAGAATGTGATAGAGTCGGATAGTAGCACACCTGCTCTATACAGTGAAAAGGAGAAGGTGAGATGCAACAAGAGGAAGATGAAAAGTGAGAAGAAGAAGAAGAGGGTGAGAAGGAACAGTAACAGCAATAACAGTGAAGACATGGAGATAGCAGAAAGCATAAGGTGGCTAGCAGAAGTGGTGGTGAGGTCAGAAGAAAGCAGAATGGAGACAATGAAAGAGATTGAGAAGATGAGGGTTGAAGCTGAGGCAAAGAGAGGGGAGATGGAGCTCAAGAGAACTGAGATCATAGCCAACACTCAACTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAAAGATGTTGATTCTTCACTAAGAATTGGAAGAAGTTAA 1050 0.459 MEEKSEKQDDSHPSLFLPDHATIKEDNSPRKVIVGGGDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVAKHVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATTADASSWPLYSRLDLLLRGTGPISSFPTPNPTPTTPTLTPTTIAPSFQPPHAATNSNQALVLLDPPSLAVSQAPPSAAPPPPTQNSHGSNGDERLIKEDGLGGKSCEDVSEKNVIESDSSTPALYSEKEKVRCNKRKMKSEKKKKRVRRNSNSNNSEDMEIAESIRWLAEVVVRSEESRMETMKEIEKMRVEAEAKRGEMELKRTEIIANTQLEIARIFASVNKDVDSSLRIGRS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00431 349 MobiDBLite consensus disorder prediction 205 228 - -
Viun1g00431 349 MobiDBLite consensus disorder prediction 83 98 - -
Viun1g00431 349 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 34 336 IPR044823 -
Viun1g00431 349 Pfam Myb/SANT-like DNA-binding domain 42 129 IPR044822 -
Viun1g00431 349 MobiDBLite consensus disorder prediction 153 167 - -
Viun1g00431 349 MobiDBLite consensus disorder prediction 183 272 - -
Viun1g00431 349 MobiDBLite consensus disorder prediction 249 263 - -
Viun1g00431 349 MobiDBLite consensus disorder prediction 135 167 - -
Viun1g00431 349 FunFam Trihelix transcription factor ASIL2 45 110 - -
Viun1g00431 349 Coils Coil 297 317 - -
Viun1g00431 349 Gene3D - 45 110 - -
Viun1g00431 349 MobiDBLite consensus disorder prediction 1 35 - -
Viun1g00431 349 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00431 Viun-Chr1 3294437 3296772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00431 5 332 Trihelix Transcription Factor Family AT3G14180 26.486 1.25e-23 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun1g00431 Myb_DNA-bind_4 8.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00431 - - gmx:100799917 437.187