Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00421 ATGGTTTTAACAGTAAAACTGATAACCATGGTTAGCACTTGCCATAAAAGTCACAAAGAAGCATACATTACTTCCTTACTGATTTTATTGTTGGTATATTCTGCACTTCAGCATCATATTGAATCCAAAGAAGCTATGGCTTTTGTGGGAGAAGCTTTCCTCTCAGCTGCTGTGGAGGTGTTGTTGAACAGGATCATTTCCTGTGAGTTCCAAGACTTCTTTCACAGCAAGAAGCTTGACTTTTTGCCACTGAGAAAGCTTAGAATAACACTGCTGAGTCTTCAAGCTGTACTTAATGATGCAGAAGAGAGACAGATCACCAACCCTGCAGTCAAGGAATGGCTGGATGAGCTCACACAAGCTGTCTTTGATGCAGAAGATTTGCTGGATGAAATCAACACTGAGGCTTTGCGATGCAAATTAGAAGCCAACTCTCTGAGTCAATCCACTACTGATCAGGTGCTGAACTTCTTTTCCTCCCCTTTCAACAATTTTCAAAAAGTTACCAATTCCAAAATACAAGAATTGTTCCAAAGATTAGAACAATTTACACTGCAAAAAGACATCCTTCAACTAAAAGAAGGTGTTTCCAGCCGTGTCTGGCATAGAACTCCTACTAGTTCTGTGGTGGATGAATCCACTATTTATGGCAGAGATGGTGACAGACAGAAACTGGTAAGTTATTTGCTGTCAGAAGATGCTGGTGGCTGTAAAGTAGGAGTGATTTCCATTGTGGGCATGGGAGGGCTTGGGAAAACAACACTTGCCAAACTCCTTTACAATGATCCAAATGCACAAGAGAAATTTGATTTGAAAGCATGGACACATATTTCTGATGATTTTGATGTTTGCAAGGTTACTAAAACCATTCTTGAATCTGTCTCCTTCAAATCAAACGATATAAATAACCTGAATATTCTACAAGTGGAATTGAAGCAAAGCTTAAGCAACAAAAGATTTTTGCTTGTATTGGATGACATATGGGATGGGAGCTATGTTGATTGGAACAATCTGATGGATATTTTCAGTGCTGGGAAAATGGGGAGTAGAATCATCATCACAACTCGAGATGAGAGTGTCGCAAGAGCCATGCAAACTTTTTTACCTATCCACCATTTGACATCTCTGACTAGTGAAGATTGCTGGTCTTTACTTGCTAGACATGCATTTGGAGCAAATAATTGCAGCCAACACTCAACCCTAGAAGAAATTGGTAAAGAAATAGCAAAAAAATGTGATGGGTTACCATTAGCTGCAGTAACAGTTGGGGGTCTTCTTCGTACCAAATTATCAGAAAATTATTGGACCAAAGTATTAAAAAGTAACATTTGGGATTTGCCCAATGTTAAGGTTCTGCCAGCTCTACTGTTGAGCTATCATTACCTCCCTGGTCCTTTGAAACGATGCTTCGCTTACCTATCCATATTCCCAAAGAACTCCAAGATAGAAAAAGAGATGGTGGTTCGGTTATGGATTGCAGAAGGCTTAGTATGTCAGTCCAAAAGTGACAAAACTATGGAAGAAATCGGTGATGAATACTTTGATGAACTAGTATCAAGGTCACTGATACACAGGTCACTAACCTGGCATGCAAAATTTAAAATGCATGACCTGATCAATGGTTTAGCCACAATGATTTCATCTACATACTGTGTCAGGCGTGAGGATACAATGTCACATGCAAGTGTTGAAAGAATTCGTCATTTTTCATACAATAGAGGAGAGTATGACTCTTTCAATAAATTTGATCACTTTTATGAATCAAAAGGTTTGCGTTCCTTCATAGCCTTACCATTAAGACTATGGTGGATACGAAATGGTCGTTTTTCCGCTCAACACTTGTCAAACAAGGTAGTACATGACTTGTTACCAGCAATGACAAAGCTAAGGGTGTTGTCCTTGTCACACTACGTGAATATCACTGAGTTGCCTAATTGTCTTGGAAATTTGATTTTTCTGCGATACTTAGATCTTTCTAACACTAGAATTCAGAGATTGCCAGAAGTAACATGCAAGCTCTACAATATGCAGACCTTGTTGTTGTCCAATTGTTGGTCACTCACTGAATTGCCTGAGGACATTGGAAATTTGGTAAATCTACAGCATTTAGACAACAGTGGGACTAGATTGAATAAAATGCCTAAACAAATAGCCACACTACAAAATCTTCAAACCTTGTCCACCTTCGTTATCAGTAAGCCACAAGATGGATTGATGGTTGGAGAGCTGAAAAATTTTCCCCGTCTACAAGGGAAACTCTCCATTCTGAAGCTACAAAATGTAGTAGACCCCTCTGAAGCTTTCCAAGCCAATTTGAAGAACAGAGAACAAATAAATGAGTTAGCACTAGAATGGGATTGTGGTACAACTGAAGACACACAAACTGAAAGGCTTGTACTTGAGCAGCTGCAGCCTCCAGCAAACTTGAAGAAACTGACCATCAAGTGTTATGGTGGAACGAGCTTTCCAAATTGGCTGGGTGATCCTGCATTTGATAACATGGTGCACTTACGCATCAGTGGCTGTGATCATTGTTGGTCACTGCCTCCCCTTGGGAGATTAGTTAGTCTCAAAGAACTCTACATTTCTGACATGAAATTAGTGAAGACTGTTGATACTGAATTCTATGGAAGTACTTCACCTTCATTTCAACCGTTTCCCTCCTTGGTGATTTTGAGCTTTGAGGGGATGCTAGGGTGGGAAGAATGGAATATGATCGGAGGTACAGTTATAGAGTTTCCTAGCCTATCAGATCTCTCTCTCAAGAATTGTCCCAAACTCAAAGGAACCTTACCCACCAATTGCCCTTACCCAATTGATTTTGAGCTATCAGGTTGTCCATTACTGTTTGCAATGGTATGTCCTGAACTCAAAGAAAGCAATCTCCATTCCTCAATTGAACTTCAGTCCACCAGTAACATCCTAAACTTGACTATCTCAGGCGTTACCTCCCCAGCATCCCTTAGAGATGGTCTGCCCACAACACTGAAATATCTCACTTTACGTAATTGTAAGAAGCTGGAATTCCTGCCTCATGAAACCTTGAACAATTACACATCACTTAAGGAATTAACAATATTTAATAGTTGTCATTCATTGACTTCCTTTACCTTAGGTTGTCTTCCTGTGCTAGAAAGTCTTAGTATCTCTGGTTGTAAGAATTTGAAATCTATTTCTATCGCAGAAAACTCTTCCCCAAGTCTCTCACTTCTTCAGTGGTTGAGCATAAGATCTTGTCCGGAACTTGACTCATTTCCCGCAGGTGGATTGCTCATTCCTAACCTCACTACTCTGGCTATGTCGTCCTGTGACAAGCTCAATTCACTCCCTGTACCAATTAACACTCTTGCTCCCCTTCAAACGTTGAGCATTCAGAATCTTCCAAATCTTGAGTCTTTTGCCCAGGAGGGTTTGCCTATCAGGCTACGCAGTTTTACTGTATGGAGTAGAGGGAGTTTCTTGACAACAACTATCGGTGAGTGGGGTTTGCAGAAGCTCACTTGTCTTTCATCATTGCGTATTGGAGGTGATGAAATTTTGAATGCGTTTATGAGGATGAAAATGCCATTGCTGCCTACTTCTCTTGTGTCCTTATCCATATGTAATAGTTTTGGTATAAAATGCTTGGATGGGAAGTGGCTTCAGCATCTAACCTCTCTTGAAAAGCTTGAGATTCAATGTTTTCGCCAACTTGAATTCTTACCTGAAGAGGGATTGCCTTCCACTCTTTCAGTATTGACCATCTGGAAGTGTCCATCATTAGAAGTTAGTTGTAGCAACGGAGGGAAAAATTGGCCGAAGATTTCTCACATTCCGTGCATAATTATTAACAAGGAAGTGATCATATAA 3849 0.4014 MVLTVKLITMVSTCHKSHKEAYITSLLILLLVYSALQHHIESKEAMAFVGEAFLSAAVEVLLNRIISCEFQDFFHSKKLDFLPLRKLRITLLSLQAVLNDAEERQITNPAVKEWLDELTQAVFDAEDLLDEINTEALRCKLEANSLSQSTTDQVLNFFSSPFNNFQKVTNSKIQELFQRLEQFTLQKDILQLKEGVSSRVWHRTPTSSVVDESTIYGRDGDRQKLVSYLLSEDAGGCKVGVISIVGMGGLGKTTLAKLLYNDPNAQEKFDLKAWTHISDDFDVCKVTKTILESVSFKSNDINNLNILQVELKQSLSNKRFLLVLDDIWDGSYVDWNNLMDIFSAGKMGSRIIITTRDESVARAMQTFLPIHHLTSLTSEDCWSLLARHAFGANNCSQHSTLEEIGKEIAKKCDGLPLAAVTVGGLLRTKLSENYWTKVLKSNIWDLPNVKVLPALLLSYHYLPGPLKRCFAYLSIFPKNSKIEKEMVVRLWIAEGLVCQSKSDKTMEEIGDEYFDELVSRSLIHRSLTWHAKFKMHDLINGLATMISSTYCVRREDTMSHASVERIRHFSYNRGEYDSFNKFDHFYESKGLRSFIALPLRLWWIRNGRFSAQHLSNKVVHDLLPAMTKLRVLSLSHYVNITELPNCLGNLIFLRYLDLSNTRIQRLPEVTCKLYNMQTLLLSNCWSLTELPEDIGNLVNLQHLDNSGTRLNKMPKQIATLQNLQTLSTFVISKPQDGLMVGELKNFPRLQGKLSILKLQNVVDPSEAFQANLKNREQINELALEWDCGTTEDTQTERLVLEQLQPPANLKKLTIKCYGGTSFPNWLGDPAFDNMVHLRISGCDHCWSLPPLGRLVSLKELYISDMKLVKTVDTEFYGSTSPSFQPFPSLVILSFEGMLGWEEWNMIGGTVIEFPSLSDLSLKNCPKLKGTLPTNCPYPIDFELSGCPLLFAMVCPELKESNLHSSIELQSTSNILNLTISGVTSPASLRDGLPTTLKYLTLRNCKKLEFLPHETLNNYTSLKELTIFNSCHSLTSFTLGCLPVLESLSISGCKNLKSISIAENSSPSLSLLQWLSIRSCPELDSFPAGGLLIPNLTTLAMSSCDKLNSLPVPINTLAPLQTLSIQNLPNLESFAQEGLPIRLRSFTVWSRGSFLTTTIGEWGLQKLTCLSSLRIGGDEILNAFMRMKMPLLPTSLVSLSICNSFGIKCLDGKWLQHLTSLEKLEIQCFRQLEFLPEEGLPSTLSVLTIWKCPSLEVSCSNGGKNWPKISHIPCIIINKEVII 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00421 1282 Gene3D - 198 368 IPR027417 -
Viun1g00421 1282 Pfam Rx N-terminal domain 83 146 IPR041118 -
Viun1g00421 1282 PRINTS Disease resistance protein signature 241 256 - -
Viun1g00421 1282 PRINTS Disease resistance protein signature 1039 1055 - -
Viun1g00421 1282 PRINTS Disease resistance protein signature 412 426 - -
Viun1g00421 1282 PRINTS Disease resistance protein signature 314 328 - -
Viun1g00421 1282 Gene3D Ribonuclease Inhibitor 603 979 IPR032675 -
Viun1g00421 1282 FunFam Probable disease resistance protein At1g61300 198 367 - -
Viun1g00421 1282 Coils Coil 84 104 - -
Viun1g00421 1282 Gene3D - 82 173 - -
Viun1g00421 1282 PANTHER DISEASE RESISTANCE PROTEIN RP 77 922 IPR044974 GO:0006952
Viun1g00421 1282 Gene3D - 375 457 IPR042197 -
Viun1g00421 1282 Coils Coil 115 135 - -
Viun1g00421 1282 Pfam NB-ARC domain 236 440 IPR002182 GO:0043531
Viun1g00421 1282 SUPERFAMILY L domain-like 534 956 - -
Viun1g00421 1282 SUPERFAMILY L domain-like 966 1269 - -
Viun1g00421 1282 Gene3D - 458 544 IPR036388 -
Viun1g00421 1282 Coils Coil 173 193 - -
Viun1g00421 1282 FunFam Probable disease resistance protein At1g63360 459 545 - -
Viun1g00421 1282 Gene3D Ribonuclease Inhibitor 983 1271 IPR032675 -
Viun1g00421 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 473 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00421 Viun-Chr1 3168977 3173482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00421 640 733 WRKY Transcription Factor Family AT4G12020 37.895 1.49e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00421 - - vun:114184488 2544.61