Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g00410 ATGGCTTTTGGCTTGCCAATGAAGTCCATGGAGCCAACTATCTGTGGAGACAAGTTAGGTAACCTCATAATGGAAGTAGCTAAAAACTTTGTTGTATATATTGGGATGGTGCTTGCGTGCAATGGTTTACATTTTCTACTAAAGCCTTATAAACAACCACGCATTACTTCAGACATAATTGTGGGAATGTTGGTGGGGAACATAGGGTTTGTACGCAGGCTGTTTGAGAAATTTAACCTGACTTTTGGATTCATCATTGATTTTGGAATGACATGTTACATGTTTACCCTGGGAATAGAGATGGATCCTTATGTACTGTTTGCAAAACCAAATAGGCATACCAAAACTGCTGTAGCAGGAATTATATGCTCCTTCGTTCTGGCAGGTCTTGCAACCCCAATGTTCAAATTCTTCCCAGATGAAAACAAGCTGCTAGAGTTCACCCTAGCCTTCTCCACAATGATTTCTAGCACCGACTCACCAGTCTTGACCCGTTTAATAACCCAGCTGAAAATAGGAAAATCAGATATTGGGAAGCTCATCATTGGAGCAGGGATGCACACAGATTTTGTGTGCTGTTTGATGCTTTCCATTGGGTTCATAGCTGTGCCAATGCCAGCATATTGTCAAAATTTGCTAGCAAAGTTTGAGATTAAGAGGACTGTTAATGTAGCGTTTGCAGTGGTGGTGCAGGTAGGGTTCGCAGCCATGGTGTCACCAATGCTCATGAAGTGGGTTAGCAATGAGAACCCTGAGGGTAGACCCATGAAAGGTCCACACTTGGTACTGTCCATTGCCTTCATGGTCTTAATGTGTGCCTCCACCTCTATGTATAATTATAATCCAATTTTAAGTGCTTTTCTGGTAGGGCTTTGTGTTCCCAGGGAGGGTAGAGTTTCCAGATGGTTTATCACCAGAATCAACTACATGTTGACCACTATTTTCTTTCCCATCTTTTTCTTGTGGATGGGCTATGAATCTAATTTCAGGCAGTTTGAACTACACCATCCTGCAACATGGGTAAGACTCAGTGTGCTTTTGGTTGTTGCAGTAGCTGGAAAAGTTGTTGGAGTAGTCATCTATGGTGCCATGTCTGGTGTTCACTGGCCTGAATCTGTTGCAATAGGAATGCTCCTTGTTACTAAGGGCCATTTGCAAATCTACTTAGCTATAAAAGTGATAGGTTGTGGTGGTCTAAGTACAAGCACAGGCATTGTGATGGTACTGGGAACCTTTTTAACAGCTTTACCTGCATCAAGAATTGTAGCAAGCATCATTAGAAGAGCAAAGAAAAGAGCACCTACTCATCGTTTGGCACTTCAAATGCTTGACCCCTCAAGTGAGTTAAGGATCCTCCTGTGTGTTCAAGGGCCTCAAAATACCCCTGCTTCCATCAACTTGGTGGAGATCACAAAAGGAACTGCTGAAACCGGCATTGTGGTGTATGTCACTGACATGATTGAACTCACTGCTGAAATATCAGACTCATTGGAGAGGGATGAAGCATTGCACACAGCAACAGTGAAAGACAGGGCAGTCATGGAGAGGAGAGACCAAGTAACCAACTCATTCCAAGCCTATGTGGCAGACAATGATGATGGCATCACACTCAAAAGAACCATGACACTCTCAACAATCACTAACATGCCTCAAGACATTTTCATTTTAGCAGAGGACTTGATGATTGCCCTCATCATATTGCCATTCCACAGGAGCCAGCGTGATGATAAAAGGTTGGATAGTGGTAATCCAGGGTTCAGATACGTCAACCGAAAGGTTCTGAGAAGTGCCCCTTGTTCTGTTGGGATTCTAGTAGATAGAGGCCTTGGATCAGTTGAAGGTATAACAAAATGTGAAGCAACAGTAAATGTGGCAGTGATATTCATTGGTGGAAAAGATGATAGAGAAGCCCTTGCCTACGCTAGCCGTGTAGCGCGGCATTCACAAGTTAAACTGACAGTTCTAAGATTCCTGGTAGATAGCAGTGTGGAGTCTGCAGCATTATACAGGATCATCTCTCCAGAGCAGGAGAAAGAGATGAAATTGGATGATGAATGCTTTACACATTTCTACGAAAGGAATGTGATTGGGGGTCGGATTTCCTACATGGAGAAGCATTTTGCAAATGCTGCTGAGACATTCTCCACTCTGAGATCCTTTGAAGGACAATACTCATTGGTGATTGTTGGAAGGGAAGGAGGAACAAACTCAGTTTTGACAAGGGGCATGAATGATTGGCAACAGTGCCCAGAATTGGGACCAATAGGGGATGTTCTTTCTGGAACAGACTTCTCAATGACAGTTTCTGTTTTGATCATCCAACAACATAGACTTAGAGGAGAAATAGATGGGTTGGATGAAGATTTCTCTATCATATAA 2379 0.4292 MAFGLPMKSMEPTICGDKLGNLIMEVAKNFVVYIGMVLACNGLHFLLKPYKQPRITSDIIVGMLVGNIGFVRRLFEKFNLTFGFIIDFGMTCYMFTLGIEMDPYVLFAKPNRHTKTAVAGIICSFVLAGLATPMFKFFPDENKLLEFTLAFSTMISSTDSPVLTRLITQLKIGKSDIGKLIIGAGMHTDFVCCLMLSIGFIAVPMPAYCQNLLAKFEIKRTVNVAFAVVVQVGFAAMVSPMLMKWVSNENPEGRPMKGPHLVLSIAFMVLMCASTSMYNYNPILSAFLVGLCVPREGRVSRWFITRINYMLTTIFFPIFFLWMGYESNFRQFELHHPATWVRLSVLLVVAVAGKVVGVVIYGAMSGVHWPESVAIGMLLVTKGHLQIYLAIKVIGCGGLSTSTGIVMVLGTFLTALPASRIVASIIRRAKKRAPTHRLALQMLDPSSELRILLCVQGPQNTPASINLVEITKGTAETGIVVYVTDMIELTAEISDSLERDEALHTATVKDRAVMERRDQVTNSFQAYVADNDDGITLKRTMTLSTITNMPQDIFILAEDLMIALIILPFHRSQRDDKRLDSGNPGFRYVNRKVLRSAPCSVGILVDRGLGSVEGITKCEATVNVAVIFIGGKDDREALAYASRVARHSQVKLTVLRFLVDSSVESAALYRIISPEQEKEMKLDDECFTHFYERNVIGGRISYMEKHFANAAETFSTLRSFEGQYSLVIVGREGGTNSVLTRGMNDWQQCPELGPIGDVLSGTDFSMTVSVLIIQQHRLRGEIDGLDEDFSII 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g00410 792 Gene3D - 450 745 - -
Viun1g00410 792 PANTHER CATION/H + ANTIPORTER 30 777 - -
Viun1g00410 792 Pfam Sodium/hydrogen exchanger family 32 414 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun1g00410 792 Gene3D - 27 434 IPR038770 -
Viun1g00410 792 FunFam Cation/H(+) antiporter 28 27 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g00410 Viun-Chr1 3020444 3023767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g00410 14 792 Antiporter Super Family AT3G52080 46.558 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g00410 K26731 - gmx:100786469 1261.9